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STRUCTURE OF N-TERMINAL DOUBLECORTIN DOMAIN FROM DCLK: SELENOMETHIONINE LABELED PROTEIN
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 5 294 CITRATE BUFFER, AMMONIUM SULFATE, pH 5.0, VAPOR DIFFUSION, SITTING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 1.7 27.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 38.785 α = 90 b = 29.43 β = 115.72 c = 40.099 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 Double crystal focusing mirrors 2002-05-29 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X9B 0.9795,0.9791,0.9718 NSLS X9B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.6 22.82 84.6 0.038 32.5 9312 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.6 1.66 35.9 0.21 0.032
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.6 10 9312 9256 838 98.61 0.13212 0.12745 0.18046 0.1991 RANDOM 18.464
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.53 0.6 -0.89 -1.12
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.801 r_scangle_it 3.74 r_scbond_it 2.418 r_mcangle_it 2.142 r_sphericity_bonded 1.841 r_angle_refined_deg 1.509 r_rigid_bond_restr 1.497 r_mcbond_it 1.259 r_angle_other_deg 0.883 r_symmetry_vdw_other 0.298
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 5.801 r_scangle_it 3.74 r_scbond_it 2.418 r_mcangle_it 2.142 r_sphericity_bonded 1.841 r_angle_refined_deg 1.509 r_rigid_bond_restr 1.497 r_mcbond_it 1.259 r_angle_other_deg 0.883 r_symmetry_vdw_other 0.298 r_nbd_other 0.266 r_nbd_refined 0.243 r_symmetry_hbond_refined 0.209 r_xyhbond_nbd_refined 0.208 r_symmetry_vdw_refined 0.204 r_chiral_restr 0.104 r_nbtor_other 0.082 r_bond_refined_d 0.016 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 855 Nucleic Acid Atoms Solvent Atoms 134 Heterogen Atoms 10
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELXS phasing REFMAC refinement