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CRYSTAL STRUCTURE OF DNA REPLICATION INITIATION FACTOR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 294 sodium acetate, potassium chloride, hexanediol, PEG MME 2000, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K
Crystal Properties Matthews coefficient Solvent content 4.14 67
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 155.752 α = 90 b = 155.752 β = 90 c = 155.752 γ = 90
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 210 2001-12-21 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 8.3.1 0.9797,1.1272 ALS 8.3.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 30 99.6 0.058 15.5 5 17436 17366 69.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.8 100 0.33 5.1 5 1720
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.7 19.78 15895 15831 1458 99.6 0.23083 0.23083 0.22863 0.222 0.25484 0.245 RANDOM 41.996
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 20.039 r_dihedral_angle_1_deg 3.467 r_scangle_it 3.188 r_scbond_it 1.847 r_mcangle_it 1.173 r_angle_refined_deg 1.165 r_mcbond_it 0.583 r_symmetry_hbond_refined 0.403 r_nbd_refined 0.278 r_symmetry_vdw_refined 0.259
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 20.039 r_dihedral_angle_1_deg 3.467 r_scangle_it 3.188 r_scbond_it 1.847 r_mcangle_it 1.173 r_angle_refined_deg 1.165 r_mcbond_it 0.583 r_symmetry_hbond_refined 0.403 r_nbd_refined 0.278 r_symmetry_vdw_refined 0.259 r_xyhbond_nbd_refined 0.164 r_chiral_restr 0.094 r_bond_refined_d 0.011 r_gen_planes_refined 0.004 r_bond_other_d r_angle_other_deg r_gen_planes_other r_nbd_other r_nbtor_other r_xyhbond_nbd_other r_symmetry_vdw_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2638 Nucleic Acid Atoms Solvent Atoms 47 Heterogen Atoms 28
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHARP phasing REFMAC refinement