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THE SOLUTION STRUCTURE OF THE MUTANT 5'AUG3' TRILOOP IN THE RNA PROMOTER REGION OF THE BROME MOSAIC VIRUS GENOMIC (+)-RNA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 2 mM RNA triloop 13mer,
10mM Na Phosphate, pH=6.5 90% H2O/10% D2O 10 mM NaCl 6.5 ambient 293 2 2D NOESY 2 mM RNA triloop 13mer,
10mM Na Phosphate, pH=6.5 90% H2O/10% D2O 10 mM NaCl 6.5 ambient 283 3 DQF-COSY 2 mM RNA triloop 13mer,
10mM Na Phosphate, pH=6.5 90% H2O/10% D2O 10 mM NaCl 6.5 ambient 293 4 2D NOESY 2 mM RNA triloop 13mer,
10mM Na Phosphate, pH=6.5 90% H2O/10% D2O 10 mM NaCl 6.5 ambient 283
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker AMX 600
NMR Refinement Method Details Software simulated annealing
restrained molecular dynamics X-PLOR
NMR Ensemble Information Conformer Selection Criteria a strucutre averaged over these 17 calculated structures. Conformers Calculated Total Number 17 Conformers Submitted Total Number 1 Representative Model (minimized average structure)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution X-PLOR 3.1 Axel Brunger 2 collection XwinNMR 3 collection UXNMR 4 data analysis Felix 5 refinement X-PLOR 3.1 Axel Brunger