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Solution Structure of an RNA Hairpin from HRV-14
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0 100% D2O 100 mM 7.0 ambient 298 2 DQF-COSY 1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0 100% D2O 100 mM 7.0 ambient 298 3 TOCSY 1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0 100% D2O 100 mM 7.0 ambient 298 4 1H,31P-Hetcor 1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0 100% D2O 100 mM 7.0 ambient 298 5 1H,13C-HMQC 1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0 100% D2O 100 mM 7.0 ambient 298 6 2D NOESY 0.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0 90% H2O/10% D2O 100 mM 7.0 ambient 273
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600
NMR Refinement Method Details Software simulated annealing A total of 172 distance restraints and 40 dihedral angle restraints. VNMR
NMR Ensemble Information Conformer Selection Criteria Conformers Calculated Total Number Conformers Submitted Total Number 1
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 2 processing NMRPipe 3 data analysis NMRDraw 4 data analysis NMRView 5 structure solution Discover 6 refinement Discover