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BOVINE CALBINDIN D9K BINDING MN2+
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1IG5
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 EVAPORATION 5.6 295 65 % ammonium sulphate, 600 mM MnCl2, pH 5.6, EVAPORATION, temperature 295K
Crystal Properties Matthews coefficient Solvent content 2.16 43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 33.8 α = 90 b = 33.8 β = 90 c = 129.63 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 IMAGE PLATE MARRESEARCH COLLIMATOR 1995-06-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.85 19.2 0.96 0.046 11.8 1 6482 6166 16.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.86 2 79 1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.85 10 2 6482 5068 548 74.5 0.186 0.1898 0.272 0.2635 RANDOM 23.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 21.7 c_scangle_it 5.15 c_scbond_it 3.28 c_mcangle_it 2.77 c_angle_deg 1.9 c_mcbond_it 1.76 c_improper_angle_d 1.73 c_bond_d 0.018
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 596 Nucleic Acid Atoms Solvent Atoms 39 Heterogen Atoms 1
Software Software Software Name Purpose SIGMAA model building X-PLOR refinement XDS data reduction AUTOMAR data reduction SIGMAA phasing