1HO6

CHIMERIC ARABINONUCLEIC ACID (ANA) HAIRPIN WITH ANA/RNA HYBRID STEM


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1DQF-COSY1 mM hairpinD2O7.01 atm288
22D-NOESY1 mM hairpinD2O7.01 atm288
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
NMR Refinement
MethodDetailsSoftware
simulated annealingStarting A- and B-type stem hairpin structures with randomly organized loops were refined by 14 ps restrained molecular dynamics (300-1000 K) with final enegry minimizationX-PLOR
NMR Ensemble Information
Conformer Selection Criteriaall calculated structures submitted
Conformers Calculated Total Number10
Conformers Submitted Total Number10
Representative Model1 (the hairpin stem structure closest to the average)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homo- and heteronuclear techniques: NOESY, DQF-COSY, TOCSY, H,C-HMQC and H,P-HetCOSY
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1refinementX-PLOR3.843Brunger
2data analysisX-PLORBruker