1HJ7
NMR study of a pair of LDL receptor Ca2+ binding epidermal growth factor-like domains, 20 structures
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 1H-NOESY | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 | |||
2 | COSY | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 | |||
3 | TOCSY | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 | |||
4 | 1H-15N HSQC | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 | |||
5 | HMQC-J | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 | |||
6 | HSQC-NOESY | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 | |||
7 | HSQC-TOCSY | SEE REFERENCES | SEE REFERENCES | 6.5 | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Home-built | 600 | |
2 | GE | OMEGA | 750 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | REFINEMENT DETAILS CAN BE FOUND IN REFERENCE 1. | X-PLOR |
NMR Ensemble Information | |
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Conformer Selection Criteria | NO NOE, 3JHN OR 1JHN CONSTRAINTS VIOLATED BY > 0.5 A, 5 DEGREES OR 2 HERTZ |
Conformers Calculated Total Number | 280 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | NOE DISTANCE CONSTRAINTS WERE DERIVED FROM CROSS PEAK INTENSITIES MEASURED IN 1H-HOMONUCLEAR AND 1H-15N HETERONUCLEAR NMR SPECTRA. COUPLING CONSTANTS USED TO DERIVE TORSION ANGLE CONSTRAINTS WERE MEASURED IN A 1H-15N HMQC-J SPECTRUM. SEE REFERENCE 1 FOR DETAILS OF 1JHN CONSTRAINT IMPLEMENTATION. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.851 | BRUNGER STRUCTURAL STATISTICS: FROM EXPERIMENTAL DISTANCE CONSTRAINTS (A) RMS SIGMA DEVIATIONS FROM EXP. RESTRAINTS DEVIATIONS FROM IDEAL GEOMETRY |
2 | structure solution | X-PLOR |