1F3R | pdb_00001f3r

COMPLEX BETWEEN FV ANTIBODY FRAGMENT AND AN ANALOGUE OF THE MAIN IMMUNOGENIC REGION OF THE ACETYLCHOLINE RECEPTOR

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D NOESY	0.2 mM mAb198, 10 mM MIR peptide antigen, 0.1 M phosphate buffer	90% H2O/10% D2O	0.1 M	7.2	ambient	277
2	TOCSY	0.2 mM mAb198, 10 mM MIR peptide antigen, 0.1 M phosphate buffer	90% H2O/10% D2O	0.1 M	7.2	ambient	277

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	400

NMR Refinement
Method	Details	Software
distance geometry simulated annealing docking molecular dynamics	The peptide structure is based on 73 NOE-derived distance restraints. The antibody structure is based on template structures Pot IgM and Fab D1.3 antilysozyme. The complex structure has been derived by computational docking.	UXNMR

NMR Ensemble Information
Conformer Selection Criteria	all calculated structures submitted
Conformers Calculated Total Number	1
Conformers Submitted Total Number	1
Representative Model	1 (lowest energy)

Additional NMR Experimental Information
Details	This structure was determined using standard 2D homonuclear techniques.

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	processing	UXNMR	940501.3	Bruker
2	data analysis	XEASY	1.3	Xia, Bartels
3	structure solution	DYANA	1.2	Guentert, Mumenthaler, Herrmann
4	refinement	DISCOVER3	97	MSI