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MYCOBACTERIUM TUBERCULOSIS ANTIGEN 85B WITH TREHALOSE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1F0N APO ANTIGEN 85B (PDB CODE 1F0N)
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 294 Ammonium sulfate, MPD, MES, trehalose, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 21K
Crystal Properties Matthews coefficient Solvent content 2.33 46.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.21 α = 90 b = 73.21 β = 90 c = 92.544 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 PARABOLIC COLLIMATING MIR 2000-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X8C NSLS X8C
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 100 99.8 0.068 0.068 22.5 7.6 23441 23441 -3 24.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.9 1.97 100 0.367 0.367 7.7 7.9 2310
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (I) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FREE R APO ANTIGEN 85B (PDB CODE 1F0N) 1.9 20 -3 23077 23077 1177 99.9 0.194 0.194 0.1916 0.284 RANDOM (CCP4 UNIQUEIFY)
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 2447.5
RMS Deviations Key Refinement Restraint Deviation s_similar_adp_cmpnt 0.077 s_non_zero_chiral_vol 0.038 s_zero_chiral_vol 0.031 s_from_restr_planes 0.0239 s_angle_d 0.02 s_anti_bump_dis_restr 0.007 s_bond_d 0.006 s_similar_dist s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2154 Nucleic Acid Atoms Solvent Atoms 247 Heterogen Atoms 58
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling SHELXL-97 model building SHELXL-97 refinement SHELXL-97 phasing