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MYCOBACTERIUM TUBERCULOSIS ANTIGEN 85B
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1DQZ ANTIGEN 85C, RONNING, ET AL. (2000) NAT.STRUCT.BIOL. 7(2), 141-146.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6 294 Ammonium sulfate, MES, MPD, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 21K
Crystal Properties Matthews coefficient Solvent content 2.33 46.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.21 α = 90 b = 73.21 β = 90 c = 92.544 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC 2000-01-14 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON ALS BEAMLINE 5.0.2 ALS 5.0.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 50 97.6 0.112 0.112 12.7 4.8 26822 26822 -3 24.53
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.8 1.86 97.4 0.186 0.186 6 5.1 2676
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (I) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R ANTIGEN 85C, RONNING, ET AL. (2000) NAT.STRUCT.BIOL. 7(2), 141-146. 1.8 20 -3 26529 26529 1343 97.8 0.1965 0.1941 0.1941 0.1949 0.276 RANDOM (CCP4 UNIQUEIFY)
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 2021 2384.2
RMS Deviations Key Refinement Restraint Deviation s_similar_adp_cmpnt 0.073 s_non_zero_chiral_vol 0.069 s_zero_chiral_vol 0.061 s_angle_d 0.034 s_anti_bump_dis_restr 0.022 s_from_restr_planes 0.021 s_bond_d 0.012 s_similar_dist s_rigid_bond_adp_cmpnt s_approx_iso_adps
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4173 Nucleic Acid Atoms Solvent Atoms 229 Heterogen Atoms 12
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing SHELXL-97 refinement