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SOLUTION STRUCTURE OF HTLV-1 PEPTIDE BOUND TO ITS RNA APTAMER TARGET
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 2D NOESY 1.2-2.8 mM of the complex, 10mM sodium phosphate, 0.2 mM EDTA H2O, D2O 10 mM 6.4 1 atm 298 2 reviewed in the primary citation 1.2-2.8 mM of the complex, 10mM sodium phosphate, 0.2 mM EDTA H2O, D2O 10 mM 6.4 1 atm 298
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 800
NMR Refinement Method Details Software simulated annealing with torsion angle dynamics X-PLOR
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 60 Conformers Submitted Total Number 12 Representative Model 1 (closest to the average)
Computation: NMR Software # Classification Version Software Name Author 1 structure solution X-PLOR 3.8 Brunger, A.T. 2 refinement X-PLOR 3.8 Brunger, A.T.