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SOLUTION STRUCTURE OF FRAGMENT (350-370) OF THE TRANSMEMBRANE DOMAIN OF HEPATITIS C ENVELOPE GLYCOPROTEIN E1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 DQF-COSY 4 mM E1(350-370) 50% H2O, 50% D2 trifluoroethanol (v/v) 5.7 ambient 293 2 TOCSY 4 mM E1(350-370) 50% H2O, 50% D2 trifluoroethanol (v/v) 5.7 ambient 293 3 2D NOESY 4 mM E1(350-370) 50% H2O, 50% D2 trifluoroethanol (v/v) 5.7 ambient 293
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian UNITYPLUS 500
NMR Refinement Method Details Software distance geometry, simulated annealing, molecular dynamic, energy minimization the structure is based on 337 Noe derived distance constraints VNMR
NMR Ensemble Information Conformer Selection Criteria back calculated data agree with experimental NOESY spectrum,structures with the least restraint violations,structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 1 Representative Model 1 (closest to the average)
Additional NMR Experimental Information Details sodium 2,2 dimethyl-2-silapentane-5-sulfonate (DSS) in the internal nmr reference
Computation: NMR Software # Classification Version Software Name Author 1 collection VNMR 6.1 Varian Inc. 2 structure solution X-PLOR 3.1 Brunger A.T. 3 refinement X-PLOR 3.1 Brunger A.T.