Crystallization
| Crystalization Experiments |
|---|
| ID | Method | pH | Temperature | Details |
|---|
| 1 | | 6.5 | | pH 6.50 |
| Crystal Properties |
|---|
| Matthews coefficient | Solvent content |
|---|
| 3.1 | 60 |
Crystal Data
| Unit Cell |
|---|
| Length ( Å ) | Angle ( ˚ ) |
|---|
| a = 103.26 | α = 90 |
| b = 79.38 | β = 101.39 |
| c = 130.1 | γ = 90 |
| Symmetry |
|---|
| Space Group | P 1 21 1 |
|---|
Diffraction
| Diffraction Experiment |
|---|
| ID # | Crystal ID | Scattering Type | Data Collection Temperature | Detector | Detector Type | Details | Collection Date | Monochromator | Protocol |
|---|
| 1 | 1 | x-ray | 110 | CCD | ADSC CCD | MIRRORS | 1999-02-15 | M | MAD |
| Radiation Source |
|---|
| ID # | Source | Type | Wavelength List | Synchrotron Site | Beamline |
|---|
| 1 | SYNCHROTRON | ESRF BEAMLINE ID14-4 | | ESRF | ID14-4 |
Data Collection
| Overall |
|---|
| ID # | Resolution (High) | Resolution (Low) | Percent Possible (Observed) | R Merge I (Observed) | R Sym I (Observed) | Net I Over Average Sigma (I) | Redundancy | Number Reflections (All) | Number Reflections (Observed) | Observed Criterion Sigma (F) | Observed Criterion Sigma (I) | B (Isotropic) From Wilson Plot |
|---|
| 1 | 2.6 | 25 | 99.3 | 0.085 | 0.085 | 5.6 | 3.7 | | 63354 | | | 66 |
| Highest Resolution Shell |
|---|
| ID # | Resolution (High) | Resolution (Low) | Percent Possible (All) | Percent Possible (Observed) | R-Sym I (Observed) | Mean I Over Sigma (Observed) | Redundancy | Number Unique Reflections (All) |
|---|
| 1 | 2.6 | 2.64 | 99.3 | | 0.48 | 1.3 | 3.7 | |
Refinement
| Statistics |
|---|
| Diffraction ID | Structure Solution Method | Cross Validation method | Resolution (High) | Resolution (Low) | Number Reflections (Observed) | Number Reflections (R-Free) | Percent Reflections (Observed) | R-Factor (Observed) | R-Work (Depositor) | R-Work (DCC) | R-Free (Depositor) | R-Free (DCC) | R-Free Selection Details | Mean Isotropic B |
|---|
| X-RAY DIFFRACTION | MAD | THROUGHOUT | 2.6 | 23.82 | 63323 | 1905 | 99.3 | 0.268 | 0.268 | 0.259 | 0.287 | 0.2859 | SHELLS | 56 |
| Temperature Factor Modeling |
|---|
| Anisotropic B[1][1] | Anisotropic B[1][2] | Anisotropic B[1][3] | Anisotropic B[2][2] | Anisotropic B[2][3] | Anisotropic B[3][3] |
|---|
| -8.59 | | 0.96 | 4.23 | | 4.36 |
| RMS Deviations |
|---|
| Key | Refinement Restraint Deviation |
|---|
| c_dihedral_angle_d | 24.8 |
| c_scangle_it | 4.6 |
| c_mcangle_it | 3.36 |
| c_scbond_it | 3.12 |
| c_mcbond_it | 2.04 |
| c_angle_deg | 1.4 |
| c_improper_angle_d | 0.77 |
| c_bond_d | 0.007 |
| c_bond_d_na | |
| c_bond_d_prot | |
| RMS Deviations |
|---|
| Key | Refinement Restraint Deviation |
|---|
| c_dihedral_angle_d | 24.8 |
| c_scangle_it | 4.6 |
| c_mcangle_it | 3.36 |
| c_scbond_it | 3.12 |
| c_mcbond_it | 2.04 |
| c_angle_deg | 1.4 |
| c_improper_angle_d | 0.77 |
| c_bond_d | 0.007 |
| c_bond_d_na | |
| c_bond_d_prot | |
| c_angle_d | |
| c_angle_d_na | |
| c_angle_d_prot | |
| c_angle_deg_na | |
| c_angle_deg_prot | |
| c_dihedral_angle_d_na | |
| c_dihedral_angle_d_prot | |
| c_improper_angle_d_na | |
| c_improper_angle_d_prot | |
| Non-Hydrogen Atoms Used in Refinement |
|---|
| Non-Hydrogen Atoms | Number |
|---|
| Protein Atoms | 9539 |
| Nucleic Acid Atoms | |
| Solvent Atoms | 157 |
| Heterogen Atoms | |
Software
| Software |
|---|
| Software Name | Purpose |
|---|
| CNS | refinement |
| MOSFLM | data reduction |
| SCALA | data scaling |
| SOLVE | phasing |