1E1Q

BOVINE MITOCHONDRIAL F1-ATPASE AT 100K


X-RAY DIFFRACTION

Starting Model(s)

Initial Refinement Model(s)
TypeSourceAccession CodeDetails
experimental modelPDB 1BMFPDB CODE 1BMF, BOVINE MITOCHONDRIAL F1-ATPASE

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
18pH 8.00
Crystal Properties
Matthews coefficientSolvent content
354

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 280.8α = 90
b = 107.4β = 90
c = 139.6γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100IMAGE PLATEMARRESEARCH1996-02-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID2ESRFID2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.612094.80.06118.13.0312140853.2
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
12.612.7599.10.2027.12.6

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB CODE 1BMF, BOVINE MITOCHONDRIAL F1-ATPASE2.6120115942950.2320.28RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor32.2
p_staggered_tor17.6
p_scangle_it7.5
p_scbond_it5.8
p_planar_tor3.5
p_mcangle_it3.3
p_mcbond_it2.1
p_multtor_nbd0.22
p_singtor_nbd0.19
p_xyhbond_nbd0.19
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor32.2
p_staggered_tor17.6
p_scangle_it7.5
p_scbond_it5.8
p_planar_tor3.5
p_mcangle_it3.3
p_mcbond_it2.1
p_multtor_nbd0.22
p_singtor_nbd0.19
p_xyhbond_nbd0.19
p_hb_or_metal_coord0.142
p_chiral_restr0.12
p_planar_d0.037
p_angle_d0.027
p_plane_restr0.02
p_bond_d0.011
p_angle_deg
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms22663
Nucleic Acid Atoms
Solvent Atoms542
Heterogen Atoms161

Software

Software
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
AMoREphasing