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SOLUTION STRUCTURE OF THE METHYL-CPG-BINDING DOMAIN OF THE METHYLATION-DEPENDENT TRANSCRIPTIONAL REPRESSOR MBD1/PCM1
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-SEPARATED_NOESY 1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT 50mM KCL 6.5 1 ATMOSPHERE 303 2 3D_13C-SEPARATED_NOESY 1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT 50mM KCL 6.5 1 ATMOSPHERE 303 3 4D_13C/13C-SEPARATED_NOESY 1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT 50mM KCL 6.5 1 ATMOSPHERE 303 4 4D_13C/15N-SEPARATED_NOESY 1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT 50mM KCL 6.5 1 ATMOSPHERE 303 5 HMQC-J 1.3MM MBD U-15N,13C; 20MM PHOSPHATE BUFFER; 50MM KCL; 5MM DTT 50mM KCL 6.5 1 ATMOSPHERE 303
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 500 2 Bruker DMX 500 3 Bruker DRX 800
NMR Refinement Method Details Software STRUCTURE CALCULATIONS WERE PERFORMED FOLLOWING SIMULATED ANNEALING PROTOCOLS
USING X-PLOR 3.8. THE STRUCTURES ARE BASED ON A TOTAL OF 1270 NOE CONSTRAINTS, 44 DIHEDRAL ANGLE
CONSTRAINTS AND 15 HYDROGEN BONDS. NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 125 Conformers Submitted Total Number 25 Representative Model 1 (lowest energy)
Additional NMR Experimental Information Details THE STRUCTURE WAS DETERMINED USING MULTI-DIMENSIONAL HETERONUCLEAR NMR
SPECTROSCOPY.
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 1.7 DELAGLIO 2 data analysis PIPP 97NOV GARRETT 3 refinement X-PLOR 3.8 BRUNGER