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STRUCTURAL RESPONSE TO MUTATION AT A PROTEIN-PROTEIN INTERFACE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BRS PDB ENTRY 1BRS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8 18% PEG-4K 0.1M TRIS PH8.0 0.2M LI2SO4
Crystal Properties Matthews coefficient Solvent content 2.6 52
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 206.24 α = 90 b = 43.51 β = 107.42 c = 83.69 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1997-10-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.82 33.71 91.5 0.071 7.2 3.5 59006 19.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.82 1.91 80.9 0.238 3.2 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1BRS 1.82 31 64130 91.5 0.194 0.1848 0.249 0.2358 22.52
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 28.7 p_special_tor 15 p_staggered_tor 14.4 p_planar_tor 4.1 p_scangle_it 2.65 p_mcangle_it 2.12 p_scbond_it 1.8 p_mcbond_it 1.44 p_multtor_nbd 0.245 p_singtor_nbd 0.18
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 28.7 p_special_tor 15 p_staggered_tor 14.4 p_planar_tor 4.1 p_scangle_it 2.65 p_mcangle_it 2.12 p_scbond_it 1.8 p_mcbond_it 1.44 p_multtor_nbd 0.245 p_singtor_nbd 0.18 p_xyhbond_nbd 0.13 p_chiral_restr 0.121 p_planar_d 0.03 p_angle_d 0.028 p_bond_d 0.012 p_angle_deg p_hb_or_metal_coord p_plane_restr p_xhyhbond_nbd p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4786 Nucleic Acid Atoms Solvent Atoms 582 Heterogen Atoms 10
Software Software Software Name Purpose AMoRE phasing REFMAC refinement MOSFLM data reduction CCP4 data scaling