1B0H

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NAPTHYLALANYL-LYSINE


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.5pH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.4750.11

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 109.961α = 90
b = 75.459β = 90
c = 70.584γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray120 MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1ROTATING ANODE

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.915980.0935.84.547086
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.9298.70.1853.8

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.9154708647086990.1850.224RANDOM27
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor13.9
p_planar_tor3.5
p_scangle_it2.388
p_mcangle_it1.792
p_scbond_it1.569
p_mcbond_it1.277
p_multtor_nbd0.249
p_singtor_nbd0.175
p_xyhbond_nbd0.123
p_plane_restr0.03
RMS Deviations
KeyRefinement Restraint Deviation
p_staggered_tor13.9
p_planar_tor3.5
p_scangle_it2.388
p_mcangle_it1.792
p_scbond_it1.569
p_mcbond_it1.277
p_multtor_nbd0.249
p_singtor_nbd0.175
p_xyhbond_nbd0.123
p_plane_restr0.03
p_angle_d0.028
p_bond_d0.011
p_angle_deg
p_planar_d
p_hb_or_metal_coord
p_chiral_restr
p_xhyhbond_nbd
p_orthonormal_tor
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4199
Nucleic Acid Atoms
Solvent Atoms415
Heterogen Atoms8

Software

Software
Software NamePurpose
DENZOdata reduction
SCALAdata scaling
REFMACrefinement
CCP4data scaling