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RIBONUCLEASE SA COMPLEX WITH BARSTAR
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BRS PDB ENTRY 1BRS
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 pH 7.0
Crystal Properties Matthews coefficient Solvent content 3.35 69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 56.95 α = 90 b = 56.95 β = 90 c = 135.8 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE MARRESEARCH MIRRORS 1996-11-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X31 EMBL/DESY, HAMBURG X31
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.7 25 100 0.046 0.046 27.3 4.7 27413 -3 20
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.7 1.72 99.8 0.308 0.308 3.7 4.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT FREE R PDB ENTRY 1BRS 1.7 25 27352 2739 100 0.162 0.16 0.1504 0.19 RANDOM 24.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 23.8 3.5 23.8 21.8
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 23.5 p_staggered_tor 17 p_planar_tor 12.8 p_scangle_it 7.4 p_scbond_it 5.5 p_mcangle_it 4.2 p_mcbond_it 2.9 p_multtor_nbd 0.264 p_chiral_restr 0.257 p_singtor_nbd 0.187
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 23.5 p_staggered_tor 17 p_planar_tor 12.8 p_scangle_it 7.4 p_scbond_it 5.5 p_mcangle_it 4.2 p_mcbond_it 2.9 p_multtor_nbd 0.264 p_chiral_restr 0.257 p_singtor_nbd 0.187 p_xhyhbond_nbd 0.143 p_xyhbond_nbd 0.143 p_planar_d 0.089 p_angle_d 0.04 p_plane_restr 0.035 p_bond_d 0.025 p_angle_deg p_hb_or_metal_coord p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1488 Nucleic Acid Atoms Solvent Atoms 190 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement