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ERYTHRINA CORALLODENDRON LECTIN
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1LTE COMPLEX WITH LACTOSE, PDB ENTRY 1LTE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 pH 7.
Crystal Properties Matthews coefficient Solvent content 3.84 68
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.605 α = 90 b = 72.881 β = 113.48 c = 71.338 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 298 IMAGE PLATE RIGAKU RAXIS II FRANCKS MIRRORS (SUPPER 2 X 6 CM MIRRORS) 1993-05-18 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH3R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.95 20 95.4 0.062 0.062 15 2.3 29424 24.3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.95 2 90 0.062 0.24 5 2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION DIFFERENCE FOURIER FROM PREVIOUSLY DETERMINED, RELATED STRUCTURE THROUGHOUT COMPLEX WITH LACTOSE, PDB ENTRY 1LTE 1.95 6 27037 2152 96.3 0.177 0.177 0.1951 0.2 RANDOM 27.4
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.14 0.76 1.77 1.37
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 27.5 c_scangle_it 5.38 c_scbond_it 3.68 c_mcangle_it 2.71 c_mcbond_it 1.76 c_angle_deg 1.5 c_improper_angle_d 1.3 c_bond_d 0.007 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 27.5 c_scangle_it 5.38 c_scbond_it 3.68 c_mcangle_it 2.71 c_mcbond_it 1.76 c_angle_deg 1.5 c_improper_angle_d 1.3 c_bond_d 0.007 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1855 Nucleic Acid Atoms Solvent Atoms 142 Heterogen Atoms 82
Software Software Software Name Purpose X-PLOR model building CNS refinement X-PLOR refinement DENZO data reduction SCALEPACK data scaling X-PLOR phasing