☰ Navigation Tabs
BARLEY 1,3-1,4-BETA-GLUCANASE IN MONOCLINIC SPACE GROUP
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1GHR PDB ENTRY 1GHR
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 5.8 PROTEIN SOLUTION: 20MM NAOAC/HOAC (PH 4.6), 2MM CACL2, C=60MG/ML. DROPLETS SIZE: 0.001 ML PROTEIN SOLUTION, 0.001 ML RESERVOIR SOLUTION; RESERVOIR SOLUTION: 100MM NAOAC/HOAC (PH 5.8), 20%(W/W) POLYETHYLENE GLYCOL 8000; VAPOUR DIFFUSION, FOUR DAYS, vapor diffusion
Crystal Properties Matthews coefficient Solvent content 2.41 25.2
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.58 α = 90 b = 82.99 β = 104.36 c = 77.56 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 294.2 IMAGE PLATE MARRESEARCH PINHOLE 1992-10-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ENRAF-NONIUS FR571
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 13.65 99.21 0.081 40727 2 14.35
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.09 96.61
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1GHR 2 13.6 2 40727 1363 99.3 0.17 0.17 0.213 RANDOM 14.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.06 x_angle_deg 1.314 x_improper_angle_d 1.184 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.06 x_angle_deg 1.314 x_improper_angle_d 1.184 x_bond_d 0.007 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot x_mcbond_it x_mcangle_it x_scbond_it x_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4528 Nucleic Acid Atoms Solvent Atoms 418 Heterogen Atoms 64
Software Software Software Name Purpose X-PLOR model building X-PLOR refinement MOSFLM data reduction Agrovata data scaling ROTAVATA data scaling X-PLOR phasing