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GAMMA S CRYSTALLIN C-TERMINAL DOMAIN
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other 1.5 angstrom coordinates of gB C-terminal domain only, resid 87-172
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 5 PROTEIN CONCENTRATION 5MGS/ML. 0.1M NA-CITRATE, PH 5.0, 20-22%(W/V) PEG8K, 2% 1,4-DIOXANE, AT ROOM-TEMPERATURE.
Crystal Properties Matthews coefficient Solvent content 2.33 43
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 62.25 α = 90 b = 62.25 β = 90 c = 170 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH PLATINUM VERTICAL MIRROR 1996-09-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX7.2 SRS PX7.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.56 45.64 98.6 0.035 14.7 5 6716 17.84
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.56 2.65 97.9 0.058 11.5 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT REFINEMENT GAMMA B C-TERMINAL 2.56 30 6709 434 98.7 0.208 0.208 0.2097 0.295 0.2928 RANDOM 25.48
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 26.13 x_mcbond_it 4.57 x_scbond_it 4.57 x_mcangle_it 2.6 x_scangle_it 2.6 x_angle_deg 1.68 x_improper_angle_d 1.46 x_bond_d 0.009 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 26.13 x_mcbond_it 4.57 x_scbond_it 4.57 x_mcangle_it 2.6 x_scangle_it 2.6 x_angle_deg 1.68 x_improper_angle_d 1.46 x_bond_d 0.009 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1444 Nucleic Acid Atoms Solvent Atoms 50 Heterogen Atoms
Software Software Software Name Purpose AMoRE phasing X-PLOR refinement DENZO data reduction CCP4 data scaling ROTAVATA data scaling