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HEMOGLOBIN (VAL BETA1 MET, TRP BETA37 TYR) MUTANT
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1A0Z BV1M STRUCTURE, PDB ENTRY 1A0Z.
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 10.5% PEG 6000 10 MM POTASSIUM PHOSPHATE PH 7.0 100 MM POTASSIUM CHLORIDE 3 MM SODIUM DITHIONITE
Crystal Properties Matthews coefficient Solvent content 2.32 47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.1 α = 90 b = 112 β = 90 c = 63.8 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 295 AREA DETECTOR XUONG-HAMLIN MULTIWIRE 1995-10-31 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 25 97.1 0.069 0.069 8.6 5.9 40226
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.15 86.3 0.191 0.191 2.24 3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION ISOMORPHOUS WITH DEOXYHEMOGLOBIN A THROUGHOUT BV1M STRUCTURE, PDB ENTRY 1A0Z. 2 8 2 44641 34844 3470 97.1 0.169 0.5314 0.223 RANDOM 21.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 32.4 p_staggered_tor 20.3 p_scangle_it 12.3 p_scbond_it 8.8 p_mcangle_it 3.5 p_planar_tor 2.8 p_mcbond_it 2.6 p_xyhbond_nbd 0.175 p_singtor_nbd 0.172 p_multtor_nbd 0.168
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 32.4 p_staggered_tor 20.3 p_scangle_it 12.3 p_scbond_it 8.8 p_mcangle_it 3.5 p_planar_tor 2.8 p_mcbond_it 2.6 p_xyhbond_nbd 0.175 p_singtor_nbd 0.172 p_multtor_nbd 0.168 p_chiral_restr 0.143 p_planar_d 0.049 p_angle_d 0.03 p_bond_d 0.013 p_plane_restr 0.013 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4382 Nucleic Acid Atoms Solvent Atoms 216 Heterogen Atoms 172
Software Software Software Name Purpose PROLSQ refinement SDMS data reduction SDMS data scaling