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Crystal Structure of FtsZ with Z453319206
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-532 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.58 52.32
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.318 α = 90 b = 88.318 β = 90 c = 177.783 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-532 ftsz-532 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-532 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-532 1.982 44.159 100 0.245 0.255 0.07 0.997 9.3 13.3 54262
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-532 1.982 2.016 100 2.636 2.742 0.755 0.375 13.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.982 44.198 54256 2725 99.952 0.179 0.1776 0.1859 0.2122 0.2178 32.756
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.005 -0.003 -0.005 0.017
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.257 r_dihedral_angle_3_deg 14.425 r_dihedral_angle_6_deg 14.09 r_lrange_it 8.822 r_lrange_other 8.793 r_scangle_it 7.393 r_scangle_other 7.392 r_dihedral_angle_1_deg 6.524 r_scbond_it 4.793 r_scbond_other 4.792
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.257 r_dihedral_angle_3_deg 14.425 r_dihedral_angle_6_deg 14.09 r_lrange_it 8.822 r_lrange_other 8.793 r_scangle_it 7.393 r_scangle_other 7.392 r_dihedral_angle_1_deg 6.524 r_scbond_it 4.793 r_scbond_other 4.792 r_mcangle_other 4.205 r_mcangle_it 4.204 r_mcbond_it 2.868 r_mcbond_other 2.861 r_angle_refined_deg 1.687 r_angle_other_deg 0.596 r_symmetry_nbd_other 0.489 r_nbd_refined 0.218 r_nbd_other 0.208 r_xyhbond_nbd_refined 0.189 r_symmetry_xyhbond_nbd_refined 0.182 r_nbtor_refined 0.17 r_symmetry_nbd_refined 0.154 r_symmetry_nbtor_other 0.14 r_symmetry_xyhbond_nbd_other 0.085 r_chiral_restr 0.078 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 43
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction