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Crystal Structure of FtsZ with Z111529496
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-481 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.59 52.5
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.396 α = 90 b = 88.396 β = 90 c = 178.114 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-481 ftsz-481 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-481 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-481 2.14 44.198 100 0.25 0.26 0.071 0.997 9.6 13.4 43293
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-481 2.14 2.177 100 2.379 2.475 0.677 0.355 13.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.14 44.237 43290 2226 99.965 0.178 0.1754 0.1836 0.218 0.2221 36.795
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.481 r_dihedral_angle_6_deg 14.338 r_lrange_it 9.107 r_lrange_other 9.075 r_dihedral_angle_2_deg 8.479 r_scangle_it 7.566 r_scangle_other 7.565 r_dihedral_angle_1_deg 6.501 r_scbond_it 4.847 r_scbond_other 4.846
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.481 r_dihedral_angle_6_deg 14.338 r_lrange_it 9.107 r_lrange_other 9.075 r_dihedral_angle_2_deg 8.479 r_scangle_it 7.566 r_scangle_other 7.565 r_dihedral_angle_1_deg 6.501 r_scbond_it 4.847 r_scbond_other 4.846 r_mcangle_other 4.476 r_mcangle_it 4.475 r_mcbond_it 3.002 r_mcbond_other 2.991 r_angle_refined_deg 1.636 r_angle_other_deg 0.61 r_symmetry_nbd_other 0.462 r_symmetry_xyhbond_nbd_refined 0.216 r_nbd_refined 0.215 r_xyhbond_nbd_refined 0.211 r_symmetry_nbd_refined 0.209 r_nbtor_refined 0.167 r_nbd_other 0.164 r_symmetry_nbtor_other 0.129 r_symmetry_xyhbond_nbd_other 0.112 r_chiral_restr 0.075 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction