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Crystal Structure of FtsZ with Z906021418
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-467 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.603 α = 90 b = 88.603 β = 90 c = 178.904 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-467 ftsz-467 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-467 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-467 1.861 44.301 100 0.166 0.172 0.047 0.999 11.2 13.3 66419
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-467 1.861 1.893 100 2.283 2.372 0.639 0.369 13.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.861 44.341 66412 3372 99.97 0.182 0.1806 0.1887 0.2099 0.2167 31.845
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.003 -0.002 -0.003 0.01
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.886 r_dihedral_angle_3_deg 14.634 r_dihedral_angle_2_deg 9.97 r_lrange_it 8.527 r_lrange_other 8.499 r_scangle_it 7.335 r_scangle_other 7.334 r_dihedral_angle_1_deg 6.599 r_scbond_it 4.818 r_scbond_other 4.817
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.886 r_dihedral_angle_3_deg 14.634 r_dihedral_angle_2_deg 9.97 r_lrange_it 8.527 r_lrange_other 8.499 r_scangle_it 7.335 r_scangle_other 7.334 r_dihedral_angle_1_deg 6.599 r_scbond_it 4.818 r_scbond_other 4.817 r_mcangle_it 4.209 r_mcangle_other 4.209 r_mcbond_it 2.933 r_mcbond_other 2.931 r_angle_refined_deg 1.758 r_angle_other_deg 0.613 r_symmetry_nbd_other 0.497 r_nbd_refined 0.22 r_nbd_other 0.219 r_xyhbond_nbd_refined 0.177 r_nbtor_refined 0.169 r_symmetry_xyhbond_nbd_refined 0.137 r_symmetry_nbd_refined 0.136 r_symmetry_nbtor_other 0.108 r_chiral_restr 0.084 r_symmetry_xyhbond_nbd_other 0.045 r_bond_refined_d 0.009 r_gen_planes_refined 0.008 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction