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Crystal Structure of FtsZ with Z1333043510
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-465 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.23
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.815 α = 90 b = 88.815 β = 90 c = 179.208 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-465 ftsz-465 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-465 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-465 1.951 44.408 100 0.17 0.177 0.048 0.998 11.2 13.3 58064
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-465 1.951 1.984 100 2.362 2.454 0.666 0.343 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.951 44.447 58055 2923 99.974 0.181 0.1792 0.1872 0.2084 0.2189 34.911
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.004 -0.002 -0.004 0.014
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.325 r_dihedral_angle_6_deg 13.539 r_lrange_it 8.766 r_lrange_other 8.715 r_dihedral_angle_2_deg 8.474 r_scangle_it 7.359 r_scangle_other 7.357 r_dihedral_angle_1_deg 6.481 r_scbond_it 4.642 r_scbond_other 4.642
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.325 r_dihedral_angle_6_deg 13.539 r_lrange_it 8.766 r_lrange_other 8.715 r_dihedral_angle_2_deg 8.474 r_scangle_it 7.359 r_scangle_other 7.357 r_dihedral_angle_1_deg 6.481 r_scbond_it 4.642 r_scbond_other 4.642 r_mcangle_it 4.345 r_mcangle_other 4.345 r_mcbond_other 2.939 r_mcbond_it 2.925 r_angle_refined_deg 1.608 r_angle_other_deg 0.528 r_symmetry_xyhbond_nbd_refined 0.235 r_nbd_refined 0.214 r_xyhbond_nbd_refined 0.197 r_symmetry_nbd_other 0.189 r_symmetry_nbd_refined 0.177 r_nbtor_refined 0.168 r_nbd_other 0.167 r_symmetry_nbtor_other 0.083 r_chiral_restr 0.074 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 305 Heterogen Atoms 35
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction