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Crystal Structure of FtsZ with Z57299529
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-426 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.24
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.903 α = 90 b = 88.903 β = 90 c = 178.891 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-426 ftsz-426 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-426 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-426 2.302 44.451 100 0.373 0.388 0.105 0.993 6.9 13.5 35370
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-426 2.302 2.342 100 3.631 3.777 1.033 0.339 13.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.302 44.491 35348 1847 99.924 0.182 0.1792 0.1861 0.2287 0.2315 39.663
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.003 0.001 0.003 -0.009
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.241 r_dihedral_angle_6_deg 13.8 r_lrange_it 9.202 r_lrange_other 9.132 r_dihedral_angle_2_deg 7.965 r_scangle_it 7.016 r_scangle_other 7.015 r_dihedral_angle_1_deg 6.703 r_mcangle_it 4.703 r_mcangle_other 4.702
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.241 r_dihedral_angle_6_deg 13.8 r_lrange_it 9.202 r_lrange_other 9.132 r_dihedral_angle_2_deg 7.965 r_scangle_it 7.016 r_scangle_other 7.015 r_dihedral_angle_1_deg 6.703 r_mcangle_it 4.703 r_mcangle_other 4.702 r_scbond_it 4.412 r_scbond_other 4.412 r_mcbond_it 2.981 r_mcbond_other 2.981 r_angle_refined_deg 1.595 r_angle_other_deg 0.605 r_symmetry_nbd_other 0.489 r_symmetry_nbd_refined 0.255 r_symmetry_xyhbond_nbd_refined 0.218 r_nbd_refined 0.215 r_xyhbond_nbd_refined 0.2 r_nbtor_refined 0.168 r_nbd_other 0.159 r_symmetry_nbtor_other 0.123 r_symmetry_xyhbond_nbd_other 0.082 r_chiral_restr 0.071 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 23
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction