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Crystal Structure of FtsZ with Z385450668
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-387 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.67 53.97
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.002 α = 90 b = 89.002 β = 90 c = 181.32 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-387 ftsz-387 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-387 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-387 2.287 44.501 100 0.267 0.277 0.076 0.996 8.4 13.5 36596
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-387 2.287 2.327 100 3.082 3.206 0.878 0.346 13.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.287 44.541 36577 1922 99.899 0.183 0.1806 0.1857 0.2337 0.232 46.505
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.011 -0.006 -0.011 0.036
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.06 r_dihedral_angle_6_deg 13.906 r_lrange_it 10.281 r_lrange_other 10.24 r_scangle_it 8.101 r_scangle_other 8.1 r_dihedral_angle_1_deg 6.927 r_dihedral_angle_2_deg 6.493 r_mcangle_other 5.609 r_mcangle_it 5.608
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.06 r_dihedral_angle_6_deg 13.906 r_lrange_it 10.281 r_lrange_other 10.24 r_scangle_it 8.101 r_scangle_other 8.1 r_dihedral_angle_1_deg 6.927 r_dihedral_angle_2_deg 6.493 r_mcangle_other 5.609 r_mcangle_it 5.608 r_scbond_it 5.176 r_scbond_other 5.175 r_mcbond_it 3.622 r_mcbond_other 3.619 r_angle_refined_deg 1.479 r_angle_other_deg 0.54 r_symmetry_nbd_other 0.451 r_symmetry_xyhbond_nbd_refined 0.252 r_nbd_refined 0.222 r_nbd_other 0.195 r_symmetry_nbd_refined 0.187 r_xyhbond_nbd_refined 0.176 r_nbtor_refined 0.169 r_symmetry_xyhbond_nbd_other 0.161 r_symmetry_nbtor_other 0.113 r_chiral_restr 0.07 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction