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Crystal Structure of FtsZ with F2147-0796
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-279 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.65 53.53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.947 α = 90 b = 88.947 β = 90 c = 179.833 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-279 ftsz-279 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-279 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-279 1.977 44.473 100 0.198 0.206 0.056 0.998 9.5 13.3 56119
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-279 1.977 2.011 100 2.53 2.63 0.717 0.334 13.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.977 44.513 55989 2800 99.765 0.183 0.1814 0.1895 0.2146 0.2226 36.587
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.004 -0.002 -0.004 0.014
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.971 r_dihedral_angle_6_deg 14.896 r_lrange_it 9.035 r_lrange_other 8.98 r_dihedral_angle_2_deg 7.839 r_scangle_it 7.694 r_scangle_other 7.693 r_dihedral_angle_1_deg 6.562 r_scbond_it 5.062 r_scbond_other 5.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.971 r_dihedral_angle_6_deg 14.896 r_lrange_it 9.035 r_lrange_other 8.98 r_dihedral_angle_2_deg 7.839 r_scangle_it 7.694 r_scangle_other 7.693 r_dihedral_angle_1_deg 6.562 r_scbond_it 5.062 r_scbond_other 5.06 r_mcangle_it 4.646 r_mcangle_other 4.646 r_mcbond_it 3.21 r_mcbond_other 3.201 r_angle_refined_deg 1.694 r_angle_other_deg 0.583 r_symmetry_xyhbond_nbd_other 0.494 r_symmetry_nbd_other 0.419 r_symmetry_xyhbond_nbd_refined 0.292 r_symmetry_nbd_refined 0.239 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.183 r_nbd_other 0.175 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.121 r_chiral_restr_other 0.111 r_chiral_restr 0.08 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction