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Crystal Structure of FtsZ with F6667-0580
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-228 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.64 53.47
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.715 α = 90 b = 88.715 β = 90 c = 180.552 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-228 ftsz-228 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-228 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-228 1.921 44.357 100 0.175 0.182 0.05 0.998 10.4 13.4 61073
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-228 1.921 1.954 100 3.014 3.133 0.852 0.361 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.921 44.397 61053 3089 99.908 0.183 0.1814 0.1892 0.2106 0.2169 35.755
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.001 -0.001 -0.001 0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.909 r_dihedral_angle_3_deg 15.175 r_dihedral_angle_6_deg 14.462 r_lrange_it 9.167 r_lrange_other 9.123 r_scangle_it 7.703 r_scangle_other 7.702 r_dihedral_angle_1_deg 6.73 r_scbond_it 5.082 r_scbond_other 5.081
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.909 r_dihedral_angle_3_deg 15.175 r_dihedral_angle_6_deg 14.462 r_lrange_it 9.167 r_lrange_other 9.123 r_scangle_it 7.703 r_scangle_other 7.702 r_dihedral_angle_1_deg 6.73 r_scbond_it 5.082 r_scbond_other 5.081 r_mcangle_other 4.516 r_mcangle_it 4.515 r_mcbond_it 3.205 r_mcbond_other 3.201 r_angle_refined_deg 1.748 r_angle_other_deg 0.616 r_symmetry_nbd_other 0.464 r_nbd_refined 0.224 r_xyhbond_nbd_refined 0.182 r_nbd_other 0.182 r_symmetry_xyhbond_nbd_other 0.175 r_nbtor_refined 0.17 r_symmetry_nbd_refined 0.167 r_symmetry_xyhbond_nbd_refined 0.146 r_symmetry_nbtor_other 0.114 r_chiral_restr 0.081 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction