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Crystal Structure of FtsZ with F5857-3414
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-225 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.94
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.631 α = 90 b = 88.631 β = 90 c = 178.847 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-225 ftsz-225 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-225 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-225 2.439 43.015 100 0.457 0.476 0.129 0.987 6.2 13.6 29563
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-225 2.439 2.481 100 2.678 2.784 0.757 0.363 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.439 43.052 29550 1499 99.936 0.18 0.1776 0.1823 0.2276 0.2284 36.477
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.011 0.005 0.011 -0.035
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.879 r_dihedral_angle_6_deg 14.536 r_lrange_it 9.489 r_lrange_other 9.419 r_dihedral_angle_2_deg 8.46 r_scangle_it 7.662 r_scangle_other 7.66 r_dihedral_angle_1_deg 6.746 r_mcangle_other 5.323 r_mcangle_it 5.321
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.879 r_dihedral_angle_6_deg 14.536 r_lrange_it 9.489 r_lrange_other 9.419 r_dihedral_angle_2_deg 8.46 r_scangle_it 7.662 r_scangle_other 7.66 r_dihedral_angle_1_deg 6.746 r_mcangle_other 5.323 r_mcangle_it 5.321 r_scbond_other 4.832 r_scbond_it 4.83 r_mcbond_it 3.41 r_mcbond_other 3.404 r_angle_refined_deg 1.663 r_angle_other_deg 0.576 r_symmetry_nbd_other 0.421 r_symmetry_xyhbond_nbd_refined 0.225 r_nbd_refined 0.217 r_nbd_other 0.205 r_symmetry_nbd_refined 0.202 r_xyhbond_nbd_refined 0.194 r_nbtor_refined 0.171 r_symmetry_nbtor_other 0.108 r_symmetry_xyhbond_nbd_other 0.08 r_chiral_restr 0.073 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 25
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction