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Crystal Structure of FtsZ with F2101-0214
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-219 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.72
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.469 α = 90 b = 88.469 β = 90 c = 178.655 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-219 ftsz-219 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-219 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-219 2.456 44.235 96.8 0.383 0.401 0.115 0.973 6.9 10.3 27914
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-219 2.456 2.498 95 2.409 2.528 0.724 0.474 9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.456 44.274 27804 1400 96.448 0.198 0.1956 0.2009 0.2451 0.2477 30.856
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.001 0.001 0.001 -0.004
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.011 r_dihedral_angle_6_deg 14.79 r_lrange_it 8.263 r_lrange_other 8.198 r_dihedral_angle_2_deg 7.509 r_dihedral_angle_1_deg 6.632 r_scangle_it 6.19 r_scangle_other 6.188 r_mcangle_other 4.44 r_mcangle_it 4.439
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.011 r_dihedral_angle_6_deg 14.79 r_lrange_it 8.263 r_lrange_other 8.198 r_dihedral_angle_2_deg 7.509 r_dihedral_angle_1_deg 6.632 r_scangle_it 6.19 r_scangle_other 6.188 r_mcangle_other 4.44 r_mcangle_it 4.439 r_scbond_it 3.804 r_scbond_other 3.803 r_mcbond_it 2.707 r_mcbond_other 2.707 r_angle_refined_deg 1.566 r_angle_other_deg 0.541 r_symmetry_nbd_other 0.439 r_nbd_refined 0.213 r_nbd_other 0.208 r_xyhbond_nbd_other 0.203 r_symmetry_xyhbond_nbd_refined 0.193 r_symmetry_nbd_refined 0.19 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.167 r_symmetry_xyhbond_nbd_other 0.13 r_symmetry_nbtor_other 0.118 r_chiral_restr 0.068 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction