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Crystal Structure of FtsZ with F2124-0068
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-203 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.19
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.645 α = 90 b = 88.645 β = 90 c = 179.732 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-203 ftsz-203 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-203 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-203 2.052 43.033 100 0.234 0.243 0.067 0.997 8.5 13.4 49876
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-203 2.052 2.087 100 2.416 2.517 0.703 0.339 12.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.051 43.07 49870 2520 99.97 0.182 0.1798 0.187 0.214 0.2206 34.89
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.01 0.005 0.01 -0.032
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_other_2_deg 20.578 r_dihedral_angle_3_deg 15.827 r_dihedral_angle_6_deg 14.484 r_lrange_it 8.752 r_lrange_other 8.683 r_dihedral_angle_2_deg 7.788 r_scangle_it 7.228 r_scangle_other 7.227 r_dihedral_angle_1_deg 6.817 r_scbond_it 4.685
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_other_2_deg 20.578 r_dihedral_angle_3_deg 15.827 r_dihedral_angle_6_deg 14.484 r_lrange_it 8.752 r_lrange_other 8.683 r_dihedral_angle_2_deg 7.788 r_scangle_it 7.228 r_scangle_other 7.227 r_dihedral_angle_1_deg 6.817 r_scbond_it 4.685 r_scbond_other 4.683 r_mcangle_other 4.192 r_mcangle_it 4.191 r_mcbond_it 2.786 r_mcbond_other 2.782 r_angle_refined_deg 1.692 r_angle_other_deg 0.647 r_symmetry_nbd_other 0.467 r_symmetry_xyhbond_nbd_other 0.364 r_symmetry_xyhbond_nbd_refined 0.225 r_nbd_refined 0.223 r_symmetry_nbd_refined 0.208 r_nbd_other 0.204 r_xyhbond_nbd_refined 0.2 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.108 r_chiral_restr 0.081 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction