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Crystal Structure of FtsZ with F6616-3157
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-185 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.675 α = 90 b = 88.675 β = 90 c = 179.161 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-185 ftsz-185 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-185 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-185 1.992 44.338 100 0.219 0.228 0.063 0.997 9.4 13.3 54286
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-185 1.992 2.027 100 2.098 2.182 0.596 0.348 13.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.992 44.377 54285 2729 99.98 0.181 0.1792 0.1873 0.2181 0.2242 31.353
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.001 0.001 -0.003
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.67 r_dihedral_angle_6_deg 14.4 r_lrange_it 9.304 r_lrange_other 9.077 r_dihedral_angle_2_deg 9.004 r_scangle_it 7.385 r_scangle_other 7.384 r_dihedral_angle_1_deg 6.517 r_scbond_it 4.713 r_scbond_other 4.713
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.67 r_dihedral_angle_6_deg 14.4 r_lrange_it 9.304 r_lrange_other 9.077 r_dihedral_angle_2_deg 9.004 r_scangle_it 7.385 r_scangle_other 7.384 r_dihedral_angle_1_deg 6.517 r_scbond_it 4.713 r_scbond_other 4.713 r_mcangle_it 4.329 r_mcangle_other 4.329 r_mcbond_other 2.918 r_mcbond_it 2.898 r_angle_refined_deg 1.755 r_angle_other_deg 0.589 r_symmetry_xyhbond_nbd_refined 0.268 r_symmetry_nbd_refined 0.22 r_nbd_refined 0.213 r_xyhbond_nbd_refined 0.208 r_nbd_other 0.197 r_symmetry_nbd_other 0.191 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.084 r_chiral_restr 0.083 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 31
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction