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Crystal Structure of FtsZ with F1905-8934
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-160 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.366 α = 90 b = 88.366 β = 90 c = 179.607 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-160 ftsz-160 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-160 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-160 2.254 42.904 100 0.317 0.33 0.09 0.993 6.7 13.4 37376
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-160 2.254 2.293 100 1.726 1.795 0.493 0.368 13.2
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.254 42.941 37371 1963 99.965 0.191 0.1888 0.194 0.2368 0.2406 34.631
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.018 0.009 0.018 -0.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.384 r_dihedral_angle_6_deg 14.41 r_dihedral_angle_2_deg 9.408 r_lrange_it 8.36 r_lrange_other 8.251 r_dihedral_angle_1_deg 6.898 r_scangle_it 6.283 r_scangle_other 6.282 r_mcangle_other 4.269 r_mcangle_it 4.268
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.384 r_dihedral_angle_6_deg 14.41 r_dihedral_angle_2_deg 9.408 r_lrange_it 8.36 r_lrange_other 8.251 r_dihedral_angle_1_deg 6.898 r_scangle_it 6.283 r_scangle_other 6.282 r_mcangle_other 4.269 r_mcangle_it 4.268 r_scbond_it 3.961 r_scbond_other 3.96 r_mcbond_it 2.712 r_mcbond_other 2.712 r_angle_refined_deg 1.537 r_angle_other_deg 0.578 r_symmetry_nbd_other 0.511 r_symmetry_xyhbond_nbd_other 0.25 r_symmetry_xyhbond_nbd_refined 0.236 r_nbd_refined 0.226 r_symmetry_nbd_refined 0.203 r_xyhbond_nbd_refined 0.2 r_nbd_other 0.193 r_nbtor_refined 0.172 r_symmetry_nbtor_other 0.121 r_chiral_restr 0.072 r_bond_refined_d 0.007 r_bond_other_d 0.005 r_gen_planes_refined 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 25
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction