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Crystal Structure of FtsZ with F0537-0331
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-124 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.592 α = 90 b = 88.592 β = 90 c = 178.099 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-124 ftsz-124 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-124 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-124 1.972 44.296 100 0.207 0.215 0.059 0.998 9.2 13.3 55533
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-124 1.972 2.006 100 2.566 2.668 0.731 0.343 13.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.972 44.335 55524 2782 99.955 0.182 0.1802 0.1881 0.2117 0.2188 34.642
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.002 0.001 0.002 -0.007
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.712 r_dihedral_angle_3_deg 14.315 r_dihedral_angle_2_deg 14.254 r_lrange_it 8.531 r_lrange_other 8.445 r_scangle_it 7.201 r_scangle_other 7.2 r_dihedral_angle_1_deg 6.294 r_scbond_it 4.606 r_scbond_other 4.606
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.712 r_dihedral_angle_3_deg 14.315 r_dihedral_angle_2_deg 14.254 r_lrange_it 8.531 r_lrange_other 8.445 r_scangle_it 7.201 r_scangle_other 7.2 r_dihedral_angle_1_deg 6.294 r_scbond_it 4.606 r_scbond_other 4.606 r_mcangle_it 4.302 r_mcangle_other 4.302 r_mcbond_other 2.865 r_mcbond_it 2.854 r_angle_refined_deg 1.607 r_angle_other_deg 0.53 r_symmetry_xyhbond_nbd_refined 0.279 r_nbd_refined 0.211 r_symmetry_nbd_other 0.189 r_xyhbond_nbd_refined 0.179 r_nbd_other 0.169 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.15 r_symmetry_nbtor_other 0.083 r_chiral_restr 0.074 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.001 r_gen_planes_other 0.001
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 26
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction