11LH | pdb_000011lh

X-RAY DIFFRACTION

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	7KHS

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION	8.75	293	22% (w/v) PEG4K, 0.15 M MgCl2, 0.1 Tris/HCl pH 8.75

Crystal Properties
Matthews coefficient	Solvent content
2.43	49.34

Symmetry
Space Group	C 1 2 1

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS PILATUS 6M-F		2017-11-27	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I04	0.9686	Diamond	I04

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.44	62.15	95.7	0.08	0.099	0.996	7.42	2.6		17213

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.44	2.69	96.3		0.485	0.598	0.808		2.8

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	2.44	62.15	16152	1061	95.81	0.22088	0.21563	0.221	0.30107	0.2995	RANDOM

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-4		-0.57	6.99		-2.28

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.905
r_dihedral_angle_4_deg	16.078
r_dihedral_angle_3_deg	14.398
r_long_range_B_refined	7.586
r_long_range_B_other	7.585
r_scangle_other	6.895
r_dihedral_angle_1_deg	6.379
r_mcangle_it	6.055
r_mcangle_other	6.055
r_scbond_it	5.273

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	32.905
r_dihedral_angle_4_deg	16.078
r_dihedral_angle_3_deg	14.398
r_long_range_B_refined	7.586
r_long_range_B_other	7.585
r_scangle_other	6.895
r_dihedral_angle_1_deg	6.379
r_mcangle_it	6.055
r_mcangle_other	6.055
r_scbond_it	5.273
r_scbond_other	5.257
r_mcbond_it	4.625
r_mcbond_other	4.624
r_angle_refined_deg	1.553
r_angle_other_deg	1.489
r_chiral_restr	0.082
r_bond_refined_d	0.013
r_gen_planes_refined	0.006
r_bond_other_d	0.003
r_gen_planes_other	0.002

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3451
Nucleic Acid Atoms
Solvent Atoms	50
Heterogen Atoms	20

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.