The structure of the Plasmodium falciparum 20S proteasome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064028 | 3000131 | SCOP2B (2022-06-29) |
| P [auth Q] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064028 | 3000131 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064064 | 3000131 | SCOP2B (2022-06-29) |
| Z [auth T] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064064 | 3000131 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064072 | 3000131 | SCOP2B (2022-06-29) |
| T [auth W] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064072 | 3000131 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064068 | 3000131 | SCOP2B (2022-06-29) |
| Y [auth U] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064068 | 3000131 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064032 | 3000131 | SCOP2B (2022-06-29) |
| Q [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064032 | 3000131 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064034 | 3000131 | SCOP2B (2022-06-29) |
| O [auth P] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064034 | 3000131 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079498 | 3000131 | SCOP2B (2022-06-29) |
| U [auth Z] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079498 | 3000131 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064070 | 3000131 | SCOP2B (2022-06-29) |
| X [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064070 | 3000131 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | RVP | e9y1oC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| P [auth Q] | RVP | e9y1oQ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| F | RVP | e9y1oF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| Z [auth T] | RVP | e9y1oT1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| I | RVP | e9y1oI1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| T [auth W] | RVP | e9y1oW1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| H | RVP | e9y1oH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| S [auth V] | RVP | e9y1oV1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| G | RVP | e9y1oG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| Y [auth U] | RVP | e9y1oU1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| E | RVP | e9y1oE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| R [auth S] | RVP | e9y1oS1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| D | RVP | e9y1oD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| Q [auth R] | RVP | e9y1oR1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| B | RVP | e9y1oB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| O [auth P] | RVP | e9y1oP1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| N [auth M] | RVP | e9y1oM1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| V [auth a] | RVP | e9y1oa1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| L | RVP | e9y1oL1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| U [auth Z] | RVP | e9y1oZ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| BA [auth Y] | RVP | e9y1oY1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| K | RVP | e9y1oK1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| AA [auth X] | RVP | e9y1oX1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| J | RVP | e9y1oJ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| A | RVP | e9y1oA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
| X [auth O] | RVP | e9y1oO1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: RVP | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C, P [auth Q] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| C, P [auth Q] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| F, Z [auth T] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| F, Z [auth T] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| I, T [auth W] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| H, S [auth V] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| G, Y [auth U] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| G, Y [auth U] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| E, R [auth S] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| D, Q [auth R] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| D, Q [auth R] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| B, O [auth P] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| B, O [auth P] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
| M [auth N], W [auth b] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| L, U [auth Z] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| BA [auth Y], K | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| AA [auth X], J | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A, X [auth O] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
| A, X [auth O] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |














