Annotations: 9V7K

Phycobilisome allophycocyanin hexamer C from Gloeobacter violaceus PCC 7421

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth B]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
F [auth D]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
L [auth J]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
N [auth L]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
J [auth H]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
H [auth F]	SCOP2B Superfamily	Globin-like	8064854	3000554	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
I [auth G]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
K [auth I]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
M [auth K]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	Globin-like	8064866	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth B]	RVP	e9v7kB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
F [auth D]	RVP	e9v7kD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
L [auth J]	RVP	e9v7kJ1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
N [auth L]	RVP	e9v7kL1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
J [auth H]	RVP	e9v7kH1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)
H [auth F]	RVP	e9v7kF1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: RVP	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
O [auth M]	PF01383	CpcD/allophycocyanin linker domain (CpcD)	CpcD/allophycocyanin linker domain		Domain
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein		Domain
A [auth 1]	PF00427	Phycobilisome Linker polypeptide (PBS_linker_poly)	Phycobilisome Linker polypeptide	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
P [auth X]	Glr2806 protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
O [auth M]	Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	Allophycocyanin beta subunit	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	Allophycocyanin alpha subunit	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B [auth Z]	Glr1262 protein	-	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome
A [auth 1]	Phycobiliprotein ApcE	lyase activity catalytic activity	photosynthesis metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
P [auth X]	IPR001297	Phycobilisome linker domain	Domain
P [auth X]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
O [auth M]	IPR011064	Allophycocyanin linker chain	Homologous Superfamily
O [auth M]	IPR011134	Allophycocyanin linker protein	Family
O [auth M]	IPR008213	CpcD-like domain	Domain
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR006245	Allophycocyanin, beta subunit	Family
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR009050	Globin-like superfamily	Homologous Superfamily
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	IPR012128	Phycobilisome, alpha/beta subunit	Family
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	IPR009050	Globin-like superfamily	Homologous Superfamily
C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], C [auth A], E [auth C], G [auth E], I [auth G], K [auth I], M [auth K]	IPR012128	Phycobilisome, alpha/beta subunit	Family
B [auth Z]	IPR001297	Phycobilisome linker domain	Domain
B [auth Z]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
A [auth 1]	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
A [auth 1]	IPR001297	Phycobilisome linker domain	Domain
A [auth 1]	IPR009050	Globin-like superfamily	Homologous Superfamily
A [auth 1]	IPR038255	Phycobilisome linker domain superfamily	Homologous Superfamily
A [auth 1]	IPR012128	Phycobilisome, alpha/beta subunit	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], D [auth B], F [auth D], H [auth F], J [auth H], L [auth J], N [auth L]	MEN	Parent Component: ASN : AA0070 : N4-methyl-L-asparagine MOD:00079

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.