9V10 | pdb_00009v10

Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0],
H [auth 7]
Cilia- and flagella-associated protein 95-
B [auth 1],
C [auth 2]
EF-hand domain-containing family member B
D [auth 3],
E [auth 4]
Cilia- and flagella-associated protein 53-
F [auth 5],
FV [auth j1],
G [auth 6]
Nucleoside diphosphate kinase homolog 7
I [auth 8]Cilia- and flagella-associated protein 107-
J [auth A],
PJ [auth N1]
Cilia- and flagella-associated protein 141-
Tubulin alpha-3 chain
Tubulin beta-4B chain
IB [auth C],
JA [auth B]
Meiosis-specific nuclear structural protein 1
Tektin-2-
FB [auth Ba],
GB [auth Bb],
HB [auth Bc]
EF-hand calcium-binding domain-containing protein 3 - -
Tektin-3-
DC [auth D],
FH [auth K3]
Sperm-associated antigen 8
Tektin-4-
OD [auth F],
QJ [auth N2],
YC [auth E]
Cilia- and flagella-associated protein 161-
CE [auth Fa],
DE [auth Fb],
EE [auth Fc],
FE [auth Fd]
Ciliary microtubule inner protein 3- - -
GE [auth G]Piercer of microtubule wall 2 protein-
VE [auth Ga]Ciliary microtubule inner protein 4- -
Ciliary microtubule inner protein 2A-
LF [auth Ha],
MF [auth Hb]
Luteinizing hormone beta- - -
OF [auth I1]Cilia- and flagella-associated protein 68-
EG [auth Ia],
FG [auth Ib],
GG [auth Ic]
Protein SPMIP1- - -
IG [auth J1],
JG [auth J2],
KG [auth J3],
LG [auth J4],
MG [auth J5]
Cilia- and flagella-associated protein 77-
DH [auth K1],
EH [auth K2]
Cilia- and flagella-associated protein 144
WH [auth Ka],
XH [auth Kb]
Protein SPMIP3- - -
ZH [auth L1]Cilia- and flagella-associated protein 90-
QI [auth La],
RI [auth Lb]
Sperm-associated microtubule inner protein 4- -
TI [auth M1],
UI [auth M2],
VI [auth M3],
WI [auth M4]
Ciliary microtubule inner protein 2C-
NJ [auth Ma]Protein SPMIP7- -
HK [auth Na],
IK [auth Nb],
JK [auth Nc],
KK [auth Nd],
LK [auth Ne]
Sperm microtubule inner protein 8-
MK [auth O],
SM [auth Q],
TL [auth P]
RIB43A-like with coiled-coils protein 1-
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
Dual specificity phosphatase 21
AQ [auth U],
FP [auth T],
RK [auth O5],
SK [auth O6],
ZQ [auth V]
EF-hand domain-containing protein 1
Sperm microtubule inner protein 6
UL [auth P1],
VL [auth P2]
Sperm microtubule inner protein 11-
TM [auth Q1],
UM [auth Q2],
VM [auth Q3],
WM [auth Q4]
Tektin bundle-interacting protein 1-
GO [auth S],
LN [auth R]
RIB43A-like with coiled-coils protein 2-
Tektin-5-
HT [auth Y],
US [auth X],
YT [auth Z],
ZR [auth W]
EF-hand domain-containing family member C2-
VS [auth X4],
WS [auth X5]
Stabilizer of axonemal microtubules 4
XS [auth X6],
YS [auth X7],
ZS [auth X8]
Testis-specific serine/threonine-protein kinase 6
Cilia- and flagella-associated protein 20-
Ciliary microtubule associated protein 1A-
Parkin coregulated gene protein homolog
DU [auth a],
IU [auth a6],
JU [auth b],
PU [auth c],
QU [auth d]
Cilia- and flagella-associated protein 45
EU [auth a1],
FU [auth a2],
GU [auth a3],
HU [auth a4]
Sperm-associated microtubule inner protein 5-
KU [auth b1],
LU [auth b2],
MU [auth b3],
NU [auth b4],
OU [auth b5]
Tektin-like protein 1-
RU [auth e],
SU [auth f],
TU [auth g]
Cilia- and flagella-associated protein 52-
EV [auth j],
GV [auth k],
UU [auth h],
ZU [auth i]
Enkurin
VU [auth h1],
WU [auth h2],
XU [auth h3],
YU [auth h4]
Sperm-associated microtubule inner protein 10-
AV [auth i1],
HV [auth l],
IV [auth m],
JV [auth n]
Protein Flattop-
KV [auth o],
LV [auth p]
Cilia- and flagella- associated protein 210-
MV [auth q],
NV [auth r],
OV [auth s]
Cilia- and flagella-associated protein 276-
QV [auth ke]Sperm microtubule inner protein 2- - -
Tektin-1-
PV [auth y]Piercer of microtubule wall 1 protein-
BV [auth i2],
CV [auth i3],
DV [auth i4]
EF-hand calcium-binding domain-containing protein 6
AM [auth P7],
WL [auth P3],
XL [auth P4],
YL [auth P5],
ZL [auth P6]
Protein SPMIP9-
ND [auth Ea]Ciliary microtubule inner protein 1- -
GA [auth Aa],
HA [auth Ab],
IA [auth Ac]
Sperm axonemal maintenance protein CFAP97D1- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0],
H [auth 7]
IPR027905Cilia- and flagella-associated protein 95Family
B [auth 1],
C [auth 2]
IPR018247EF-Hand 1, calcium-binding siteBinding Site
B [auth 1],
C [auth 2]
IPR057428EFHB, C-terminal EF-hand domainDomain
B [auth 1],
C [auth 2]
IPR002048EF-hand domainDomain
B [auth 1],
C [auth 2]
IPR011992EF-hand domain pairHomologous Superfamily
B [auth 1],
C [auth 2]
IPR040193EF-hand domain-containing protein EFHC1/EFHC2/EFHBFamily
D [auth 3],
E [auth 4]
IPR043596CFAP53/TCHPFamily
D [auth 3],
E [auth 4]
IPR043597Trichohyalin-plectin-homology domainDomain
F [auth 5],
FV [auth j1],
G [auth 6]
IPR035525NDPK7, first NDPk domainDomain
F [auth 5],
FV [auth j1],
G [auth 6]
IPR011410Nucleoside diphosphate kinase 7Family
F [auth 5],
FV [auth j1],
G [auth 6]
IPR034907Nucleoside diphosphate kinase-like domainDomain
F [auth 5],
FV [auth j1],
G [auth 6]
IPR037993NDPK7, second NDPk domainDomain
F [auth 5],
FV [auth j1],
G [auth 6]
IPR006602DM10 domainDomain
F [auth 5],
FV [auth j1],
G [auth 6]
IPR057579Nucleoside diphosphate kinase 7, DM10 domainDomain
F [auth 5],
FV [auth j1],
G [auth 6]
IPR036850Nucleoside diphosphate kinase-like domain superfamilyHomologous Superfamily
F [auth 5],
FV [auth j1],
G [auth 6]
IPR001564Nucleoside diphosphate kinaseFamily
I [auth 8]IPR054709Cilia- and flagella-associated protein 107Family
I [auth 8]IPR037662Cilia- and flagella-associated protein 68/107Family
J [auth A],
PJ [auth N1]
IPR029375Cilia- and flagella-associated protein 141Family
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR002452Alpha tubulinFamily
IPR000217TubulinFamily
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IPR008280Tubulin/FtsZ, C-terminalHomologous Superfamily
IPR017975Tubulin, conserved siteConserved Site
IPR023123Tubulin, C-terminalHomologous Superfamily
IPR002453Beta tubulinFamily
IPR013838Beta tubulin, autoregulation binding siteBinding Site
IPR018316Tubulin/FtsZ, 2-layer sandwich domainDomain
IPR003008Tubulin/FtsZ, GTPase domainDomain
IPR037103Tubulin/FtsZ-like, C-terminal domainHomologous Superfamily
IPR000217TubulinFamily
IPR036525Tubulin/FtsZ, GTPase domain superfamilyHomologous Superfamily
IB [auth C],
JA [auth B]
IPR043597Trichohyalin-plectin-homology domainDomain
IB [auth C],
JA [auth B]
IPR026504Meiosis-specific nuclear structural protein 1Family
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
FB [auth Ba],
GB [auth Bb],
HB [auth Bc]
IPR018247EF-Hand 1, calcium-binding siteBinding Site
FB [auth Ba],
GB [auth Bb],
HB [auth Bc]
IPR002048EF-hand domainDomain
FB [auth Ba],
GB [auth Bb],
HB [auth Bc]
IPR011992EF-hand domain pairHomologous Superfamily
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
DC [auth D],
FH [auth K3]
IPR026124Sperm-associated antigen 8Family
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
OD [auth F],
QJ [auth N2],
YC [auth E]
IPR036300Mir domain superfamilyHomologous Superfamily
OD [auth F],
QJ [auth N2],
YC [auth E]
IPR055325Cilia- and flagella-associated protein 161Family
CE [auth Fa],
DE [auth Fb],
EE [auth Fc],
FE [auth Fd]
IPR054446CIMIP3-likeFamily
GE [auth G]IPR026507Piercer of microtubule wall 1/2Family
VE [auth Ga]IPR029234Ciliary microtubule inner protein 4Family
IPR018902Ciliary microtubule inner protein 2A-C-like domainDomain
IPR052683Ciliary Microtubule Inner Protein 2AFamily
LF [auth Ha],
MF [auth Hb]
IPR053347Stabilizer of axonemal microtubules 3Family
OF [auth I1]IPR009524Cilia- and flagella-associated protein 68Family
OF [auth I1]IPR037662Cilia- and flagella-associated protein 68/107Family
EG [auth Ia],
FG [auth Ib],
GG [auth Ic]
IPR054323Sperm microtubule inner protein 1, C-terminalDomain
IG [auth J1],
JG [auth J2],
KG [auth J3],
LG [auth J4],
MG [auth J5]
IPR029147Cilia- and flagella-associated protein 77Family
DH [auth K1],
EH [auth K2]
IPR029214Cilia- and flagella-associated protein 144Family
WH [auth Ka],
XH [auth Kb]
IPR037668Sperm-associated microtubule inner protein 3Family
ZH [auth L1]IPR027901Cilia and flagella associated protein 90Family
QI [auth La],
RI [auth Lb]
IPR027886Sperm-associated microtubule inner protein 4Family
TI [auth M1],
UI [auth M2],
VI [auth M3],
WI [auth M4]
IPR018902Ciliary microtubule inner protein 2A-C-like domainDomain
TI [auth M1],
UI [auth M2],
VI [auth M3],
WI [auth M4]
IPR052329Ciliary Microtubule Inner Protein 2CFamily
NJ [auth Ma]IPR027867Spermatogenesis-associated protein 48Family
HK [auth Na],
IK [auth Nb],
JK [auth Nc],
KK [auth Nd],
LK [auth Ne]
IPR034584Sperm microtubule inner protein 8Family
MK [auth O],
SM [auth Q],
TL [auth P]
IPR008805RIB43AFamily
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
IPR029021Protein-tyrosine phosphatase-likeHomologous Superfamily
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
IPR000387Tyrosine-specific protein phosphatases domainDomain
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
IPR020420Atypical dual specificity phosphatase, subfamily BFamily
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
IPR020422Dual specificity protein phosphatase domainDomain
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
IPR000340Dual specificity phosphatase, catalytic domainDomain
NK [auth O1],
OK [auth O2],
PK [auth O3],
QK [auth O4]
IPR016130Protein-tyrosine phosphatase, active siteActive Site
AQ [auth U],
FP [auth T],
RK [auth O5],
SK [auth O6],
ZQ [auth V]
IPR006602DM10 domainDomain
AQ [auth U],
FP [auth T],
RK [auth O5],
SK [auth O6],
ZQ [auth V]
IPR002048EF-hand domainDomain
AQ [auth U],
FP [auth T],
RK [auth O5],
SK [auth O6],
ZQ [auth V]
IPR011992EF-hand domain pairHomologous Superfamily
AQ [auth U],
FP [auth T],
RK [auth O5],
SK [auth O6],
ZQ [auth V]
IPR040193EF-hand domain-containing protein EFHC1/EFHC2/EFHBFamily
IPR028195Sperm microtubule inner protein 6Family
UL [auth P1],
VL [auth P2]
IPR038775Sperm microtubule inner protein 11Family
TM [auth Q1],
UM [auth Q2],
VM [auth Q3],
WM [auth Q4]
IPR029203Tektin bundle-interacting protein 1Family
GO [auth S],
LN [auth R]
IPR008805RIB43AFamily
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
HT [auth Y],
US [auth X],
YT [auth Z],
ZR [auth W]
IPR006602DM10 domainDomain
HT [auth Y],
US [auth X],
YT [auth Z],
ZR [auth W]
IPR011992EF-hand domain pairHomologous Superfamily
HT [auth Y],
US [auth X],
YT [auth Z],
ZR [auth W]
IPR040193EF-hand domain-containing protein EFHC1/EFHC2/EFHBFamily
VS [auth X4],
WS [auth X5]
IPR031410Stabilizer of axonemal microtubules 4Family
XS [auth X6],
YS [auth X7],
ZS [auth X8]
IPR017441Protein kinase, ATP binding siteBinding Site
XS [auth X6],
YS [auth X7],
ZS [auth X8]
IPR042710Testis-specific serine/threonine-protein kinase 6, catalytic domainDomain
XS [auth X6],
YS [auth X7],
ZS [auth X8]
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
XS [auth X6],
YS [auth X7],
ZS [auth X8]
IPR000719Protein kinase domainDomain
XS [auth X6],
YS [auth X7],
ZS [auth X8]
IPR008271Serine/threonine-protein kinase, active siteActive Site
IPR040441Cilia- and flagella-associated protein 20/CFAP20DCFamily
IPR007714CFA20 domainDomain
IPR051291Ciliary Microtubule AssociatedFamily
IPR010736Sperm-tail PG-rich repeatRepeat
IPR019399Parkin co-regulated proteinFamily
DU [auth a],
IU [auth a6],
JU [auth b],
PU [auth c],
QU [auth d]
IPR043597Trichohyalin-plectin-homology domainDomain
DU [auth a],
IU [auth a6],
JU [auth b],
PU [auth c],
QU [auth d]
IPR033253Cilia- and flagella-associated protein 45Family
EU [auth a1],
FU [auth a2],
GU [auth a3],
HU [auth a4]
IPR043246Sperm-associated microtubule inner protein 5Family
EU [auth a1],
FU [auth a2],
GU [auth a3],
HU [auth a4]
IPR055215Sperm-associated microtubule inner protein 5 domainDomain
KU [auth b1],
LU [auth b2],
MU [auth b3],
NU [auth b4],
OU [auth b5]
IPR038949Tektin-like protein 1Family
KU [auth b1],
LU [auth b2],
MU [auth b3],
NU [auth b4],
OU [auth b5]
IPR048256Tektin-likeFamily
RU [auth e],
SU [auth f],
TU [auth g]
IPR019775WD40 repeat, conserved siteConserved Site
RU [auth e],
SU [auth f],
TU [auth g]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
RU [auth e],
SU [auth f],
TU [auth g]
IPR001680WD40 repeatRepeat
RU [auth e],
SU [auth f],
TU [auth g]
IPR050630WD repeat Echinoderm Microtubule-associated Protein-likeFamily
RU [auth e],
SU [auth f],
TU [auth g]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
EV [auth j],
GV [auth k],
UU [auth h],
ZU [auth i]
IPR027012Enkurin domainDomain
EV [auth j],
GV [auth k],
UU [auth h],
ZU [auth i]
IPR052102Enkurin domain-containing proteinFamily
VU [auth h1],
WU [auth h2],
XU [auth h3],
YU [auth h4]
IPR027965Sperm-associated microtubule inner protein 10Family
AV [auth i1],
HV [auth l],
IV [auth m],
JV [auth n]
IPR038797Protein FlattopFamily
KV [auth o],
LV [auth p]
IPR043597Trichohyalin-plectin-homology domainDomain
KV [auth o],
LV [auth p]
IPR039986Cilia- and flagella- associated protein 210Family
MV [auth q],
NV [auth r],
OV [auth s]
IPR022179Cilia- and flagella-associated protein 276Family
QV [auth ke]IPR027814Protein of unknown function DUF4562Family
IPR000435TektinsFamily
IPR048256Tektin-likeFamily
PV [auth y]IPR026507Piercer of microtubule wall 1/2Family
BV [auth i2],
CV [auth i3],
DV [auth i4]
IPR015070DJBP, EF-hand domainDomain
BV [auth i2],
CV [auth i3],
DV [auth i4]
IPR018247EF-Hand 1, calcium-binding siteBinding Site
BV [auth i2],
CV [auth i3],
DV [auth i4]
IPR002048EF-hand domainDomain
BV [auth i2],
CV [auth i3],
DV [auth i4]
IPR052603EF-hand calcium-binding domain-containing protein 6Family
BV [auth i2],
CV [auth i3],
DV [auth i4]
IPR011992EF-hand domain pairHomologous Superfamily
AM [auth P7],
WL [auth P3],
XL [auth P4],
YL [auth P5],
ZL [auth P6]
IPR029361Sperm microtubule inner protein 9Family
ND [auth Ea]IPR020339Ciliary microtubule inner protein 1-likeFamily
GA [auth Aa],
HA [auth Ab],
IA [auth Ac]
IPR029488Hemingway/CFA97Family
GA [auth Aa],
HA [auth Ab],
IA [auth Ac]
IPR038792CFAP97 domain-containing protein 1/2Family