Annotations: 9TI8

Staphylococcus aureus 50S ribosome in complex with RRF, EF-G and fusidic acid (50S-RRF-EF-G-FA)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
I [auth 9]	PF00444	Ribosomal protein L36 (Ribosomal_L36)	Ribosomal protein L36		Domain
H [auth 8]	PF01632	Ribosomal protein L35 (Ribosomal_L35p)	Ribosomal protein L35	-	Family
G [auth 7]	PF00468	Ribosomal protein L34 (Ribosomal_L34)	Ribosomal protein L34	-	Family
F [auth 6]	PF00471	Ribosomal protein L33 (Ribosomal_L33)	Ribosomal protein L33	-	Family
E [auth 5]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
D [auth 4]	PF01197	Ribosomal protein L31 (Ribosomal_L31)	Ribosomal protein L31	-	Family
EA [auth Y]	PF01386	Ribosomal L25p family (Ribosomal_L25p)	Ribosomal L25p family	Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.	Domain
DA [auth X]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
DA [auth X]	PF00467	KOW motif (KOW)	KOW motif	-	Family
C [auth 3]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
CA [auth W]	PF00276	Ribosomal protein L23 (Ribosomal_L23)	Ribosomal protein L23	-	Family
BA [auth V]	PF00237	Ribosomal protein L22p/L17e (Ribosomal_L22)	Ribosomal protein L22p/L17e	This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.	Domain
AA [auth U]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
Z [auth T]	PF00453	Ribosomal protein L20 (Ribosomal_L20)	Ribosomal protein L20	-	Family
Y [auth S]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
X [auth R]	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast	-	Family
W [auth Q]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
V [auth P]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
U [auth O]	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins.	Domain
T [auth N]	PF00238	Ribosomal protein L14p/L23e (Ribosomal_L14)	Ribosomal protein L14p/L23e		Domain
B [auth 2]	PF00831	Ribosomal L29 protein (Ribosomal_L29)	Ribosomal L29 protein	-	Family
S [auth M]	PF00572	Ribosomal protein L13 (Ribosomal_L13)	Ribosomal protein L13	-	Family
R [auth K]	PF00347	Ribosomal protein L6 (Ribosomal_L6)	Ribosomal protein L6		Domain
Q [auth J]	PF00281	Ribosomal protein L5 (Ribosomal_L5)	Ribosomal protein L5		Domain
Q [auth J]	PF00673	ribosomal L5P family C-terminus (Ribosomal_L5_C)	ribosomal L5P family C-terminus	This region is found associated with Pfam:PF00281.	Domain
P [auth I]	PF00573	Ribosomal protein L4/L1 family (Ribosomal_L4)	Ribosomal protein L4/L1 family	-	Family
O [auth H]	PF00297	Ribosomal protein L3 (Ribosomal_L3)	Ribosomal protein L3	-	Family
N [auth G]	PF03947	Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)	Ribosomal Proteins L2, C-terminal domain		Domain
N [auth G]	PF00181	Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)	Ribosomal Proteins L2, RNA binding N-terminal domain		Domain
M [auth E]	PF00679	Elongation factor G C-terminus (EFG_C)	Elongation factor G C-terminus	This domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.	Domain
M [auth E]	PF00009	Elongation factor Tu GTP binding domain (GTP_EFTU)	Elongation factor Tu GTP binding domain	This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.	Domain
M [auth E]	PF14492	Elongation Factor G, domain III (EFG_III)	Elongation Factor G, domain III	This domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].	Domain
M [auth E]	PF03144	Elongation factor Tu domain 2 (GTP_EFTU_D2)	Elongation factor Tu domain 2	Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...	Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.	Domain
M [auth E]	PF03764	Elongation factor G, domain IV (EFG_IV)	Elongation factor G, domain IV	This domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.	Domain
L [auth C]	PF01765	Ribosome recycling factor (RRF)	Ribosome recycling factor	The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth [1]. Thus ribosomes are "recycled" and ready for another round of protein synthe ...	The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth [1]. Thus ribosomes are "recycled" and ready for another round of protein synthesis.	Domain
A [auth 1]	PF00830	Ribosomal L28 family (Ribosomal_L28)	Ribosomal L28 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth 9]	50S ribosomal protein L36	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
H [auth 8]	50S ribosomal protein L35	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
G [auth 7]	50S ribosomal protein L34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
F [auth 6]	Large ribosomal subunit protein bL33A	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
E [auth 5]	Large ribosomal subunit protein bL32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
D [auth 4]	50S ribosomal protein L31 type B	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
FA [auth Z]	50S ribosomal protein L27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
EA [auth Y]	50S ribosomal protein L25	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
DA [auth X]	50S ribosomal protein L24	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
C [auth 3]	50S ribosomal protein L30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
CA [auth W]	50S ribosomal protein L23	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth V]	50S ribosomal protein L22	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
AA [auth U]	50S ribosomal protein L21	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
Z [auth T]	50S ribosomal protein L20	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal large subunit biogenesis protein-RNA complex assembly cellular component biogenesis cellular component organization ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly ribosomal large subunit assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Y [auth S]	50S ribosomal protein L19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
X [auth R]	50S ribosomal protein L18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
W [auth Q]	50S ribosomal protein L17	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
V [auth P]	50S ribosomal protein L16	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
U [auth O]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
T [auth N]	50S ribosomal protein L14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding large ribosomal subunit rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
B [auth 2]	50S ribosomal protein L29	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
S [auth M]	50S ribosomal protein L13	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process regulation of cellular process negative regulation of biological process protein biosynthetic process regulation of primary metabolic process post-transcriptional regulation of gene expression negative regulation of translation negative regulation of cellular process protein metabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process regulation of protein metabolic process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process regulation of translation negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
R [auth K]	Large ribosomal subunit protein uL6	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
Q [auth J]	50S ribosomal protein L5	RNA binding binding nucleic acid binding tRNA binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
P [auth I]	50S ribosomal protein L4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
O [auth H]	50S ribosomal protein L3	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
N [auth G]	50S ribosomal protein L2	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome transferase activity catalytic activity	primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process biosynthetic process cytoplasmic translation metabolic process cellular process protein metabolic process macromolecule metabolic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome large ribosomal subunit
M [auth E]	Elongation factor G	translation factor activity translation elongation factor activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding translation factor activity translation elongation factor activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular component organization cellular component disassembly organelle organization organelle disassembly ribosome disassembly cellular process cellular component organization or biogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm
L [auth C]	Ribosome-recycling factor	ribonucleoprotein complex binding protein-containing complex binding binding ribosomal large subunit binding ribosome binding	cellular component disassembly protein-containing complex organization protein-containing complex disassembly primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization biosynthetic process cellular process metabolic process translational termination cellular component organization or biogenesis cellular component disassembly protein-containing complex organization protein-containing complex disassembly primary metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization biosynthetic process cellular process metabolic process translational termination cellular component organization or biogenesis protein metabolic process macromolecule metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm
K [auth B]	5S rRNA	-	-	-
J [auth A]	23S rRNA	-	-	-
A [auth 1]	50S ribosomal protein L28	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
I [auth 9]	IPR000473	Large ribosomal subunit protein bL36	Family
I [auth 9]	IPR035977	Large ribosomal subunit protein bL36 superfamily	Homologous Superfamily
H [auth 8]	IPR021137	Large ribosomal subunit protein bL35-like	Family
H [auth 8]	IPR018265	Large ribosomal subunit protein bL35, conserved site	Conserved Site
H [auth 8]	IPR001706	Large ribosomal subunit protein bL35	Family
H [auth 8]	IPR037229	Large ribosomal subunit protein bL35 superfamily	Homologous Superfamily
G [auth 7]	IPR020939	Large ribosomal subunit protein bL34, conserved site	Conserved Site
G [auth 7]	IPR000271	Large ribosomal subunit protein bL34	Family
F [auth 6]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
F [auth 6]	IPR038584	Large ribosomal subunit protein bL33 superfamily	Homologous Superfamily
F [auth 6]	IPR001705	Large ribosomal subunit protein bL33	Family
F [auth 6]	IPR018264	Large ribosomal subunit protein bL33, conserved site	Conserved Site
E [auth 5]	IPR002677	Large ribosomal subunit protein bL32	Family
E [auth 5]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
E [auth 5]	IPR044957	Large ribosomal subunit protein bL32, bacteria	Family
D [auth 4]	IPR002150	Large ribosomal subunit protein bL31 type A/B	Family
D [auth 4]	IPR042105	Large ribosomal subunit protein bL31 superfamily	Homologous Superfamily
D [auth 4]	IPR027493	Large ribosomal subunit protein bL31 type B	Family
D [auth 4]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
FA [auth Z]	IPR001684	Large ribosomal subunit protein bL27	Family
FA [auth Z]	IPR018261	Large ribosomal subunit protein bL27, conserved site	Conserved Site
EA [auth Y]	IPR011035	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	Homologous Superfamily
EA [auth Y]	IPR001021	Ribosomal protein bL25, long-form	Family
EA [auth Y]	IPR029751	Large ribosomal subunit protein bL25, L25 domain	Domain
EA [auth Y]	IPR037121	Large ribosomal subunit protein bL25, C-terminal	Homologous Superfamily
EA [auth Y]	IPR020057	Large ribosomal subunit protein bL25, beta domain	Domain
EA [auth Y]	IPR020056	Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal	Homologous Superfamily
EA [auth Y]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
DA [auth X]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
DA [auth X]	IPR003256	Large ribosomal subunit protein uL24	Family
DA [auth X]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
DA [auth X]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
DA [auth X]	IPR005824	KOW	Domain
DA [auth X]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
DA [auth X]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
C [auth 3]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
C [auth 3]	IPR005996	Large ribosomal subunit protein uL30, bacteria	Family
C [auth 3]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
CA [auth W]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
CA [auth W]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
CA [auth W]	IPR013025	Large ribosomal subunit protein uL23-like	Family
BA [auth V]	IPR018260	Large ribosomal subunit protein uL22, conserved site	Conserved Site
BA [auth V]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
BA [auth V]	IPR001063	Large ribosomal subunit protein uL22	Family
BA [auth V]	IPR005727	Large ribosomal subunit protein uL22, bacterial/chloroplast-type	Family
BA [auth V]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
AA [auth U]	IPR028909	Large ribosomal subunit protein bL21-like	Family
AA [auth U]	IPR001787	Large ribosomal subunit protein bL21	Family
AA [auth U]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
Z [auth T]	IPR049946	Large ribosomal subunit protein bL20, conserved site	Conserved Site
Z [auth T]	IPR035566	Ribosomal protein bL20, C-terminal	Homologous Superfamily
Z [auth T]	IPR005813	Large ribosomal subunit protein bL20	Family
Y [auth S]	IPR001857	Large ribosomal subunit protein bL19	Family
Y [auth S]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
Y [auth S]	IPR018257	Large ribosomal subunit protein bL19, conserved site	Conserved Site
Y [auth S]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
X [auth R]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
X [auth R]	IPR057268	Large ribosomal subunit protein uL18	Family
X [auth R]	IPR004389	Large ribosomal subunit protein uL18, bacteria	Family
W [auth Q]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
W [auth Q]	IPR047859	Large ribosomal subunit protein bL17, conserved site	Conserved Site
W [auth Q]	IPR000456	Large ribosomal subunit protein bL17	Family
V [auth P]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
V [auth P]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
V [auth P]	IPR020798	Large ribosomal subunit protein uL16, conserved site	Conserved Site
V [auth P]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
V [auth P]	IPR047873	Large ribosomal subunit protein uL16	Family
U [auth O]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
U [auth O]	IPR030878	Large ribosomal subunit protein uL15	Family
U [auth O]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
U [auth O]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
U [auth O]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
T [auth N]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
T [auth N]	IPR000218	Large ribosomal subunit protein uL14	Family
T [auth N]	IPR019972	Large ribosomal subunit protein uL14, conserved site	Conserved Site
T [auth N]	IPR005745	Large ribosomal subunit protein uL14, bacteria	Family
B [auth 2]	IPR050063	Universal ribosomal protein uL29	Family
B [auth 2]	IPR001854	Large ribosomal subunit protein uL29	Family
B [auth 2]	IPR036049	Large ribosomal subunit protein uL29 superfamily	Homologous Superfamily
S [auth M]	IPR023563	Large ribosomal subunit protein uL13, conserved site	Conserved Site
S [auth M]	IPR005822	Large ribosomal subunit protein uL13	Family
S [auth M]	IPR005823	Large ribosomal subunit protein uL13, bacteria	Family
S [auth M]	IPR036899	Large ribosomal subunit protein uL13 superfamily	Homologous Superfamily
R [auth K]	IPR020040	Large ribosomal subunit protein uL6, alpha-beta domain	Domain
R [auth K]	IPR036789	Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily	Homologous Superfamily
R [auth K]	IPR000702	Large ribosomal subunit protein uL6-like	Family
R [auth K]	IPR019906	Large ribosomal subunit protein uL6, bacteria	Family
R [auth K]	IPR002358	Large ribosomal subunit protein uL6, conserved site	Conserved Site
Q [auth J]	IPR020929	Large ribosomal subunit protein uL5, conserved site	Conserved Site
Q [auth J]	IPR022803	Large ribosomal subunit protein uL5 domain superfamily	Homologous Superfamily
Q [auth J]	IPR031309	Large ribosomal subunit protein uL5, C-terminal	Domain
Q [auth J]	IPR031310	Large ribosomal subunit protein uL5, N-terminal	Domain
Q [auth J]	IPR002132	Large ribosomal subunit protein uL5	Family
Q [auth J]	IPR020930	Large ribosomal subunit protein uL5, bacteria	Family
P [auth I]	IPR013005	Large ribosomal subunit protein uL4-like	Family
P [auth I]	IPR002136	Large ribosomal subunit protein uL4	Family
P [auth I]	IPR023574	Large ribosomal subunit protein uL4 domain superfamily	Homologous Superfamily
O [auth H]	IPR019926	Large ribosomal subunit protein uL3, conserved site	Conserved Site
O [auth H]	IPR019927	Large ribosomal subunit protein uL3, bacteria/organella	Family
O [auth H]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
O [auth H]	IPR000597	Large ribosomal subunit protein uL3	Family
N [auth G]	IPR005880	Large ribosomal subunit protein uL2, bacteria/organella	Family
N [auth G]	IPR022669	Large ribosomal subunit protein uL2, C-terminal	Domain
N [auth G]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
N [auth G]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
N [auth G]	IPR022671	Large ribosomal subunit protein uL2, conserved site	Conserved Site
N [auth G]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
N [auth G]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
N [auth G]	IPR014726	Large ribosomal subunit protein uL2, domain 3	Homologous Superfamily
N [auth G]	IPR002171	Large ribosomal subunit protein uL2	Family
M [auth E]	IPR005225	Small GTP-binding domain	Domain
M [auth E]	IPR005517	Translation elongation factor EFG/EF2, domain IV	Domain
M [auth E]	IPR004540	Translation elongation factor EFG/EF2	Family
M [auth E]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
M [auth E]	IPR000640	Elongation factor EFG, domain V-like	Domain
M [auth E]	IPR031157	Tr-type G domain, conserved site	Conserved Site
M [auth E]	IPR009022	Elongation factor G, domain III	Domain
M [auth E]	IPR035647	EF-G domain III/V-like	Homologous Superfamily
M [auth E]	IPR041095	Elongation Factor G, domain II	Domain
M [auth E]	IPR004161	Translation elongation factor EFTu-like, domain 2	Domain
M [auth E]	IPR047872	Elongation factor G, domain IV	Domain
M [auth E]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
M [auth E]	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
M [auth E]	IPR035649	EFG, domain V	Domain
M [auth E]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
M [auth E]	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
L [auth C]	IPR023584	Ribosome recycling factor domain	Domain
L [auth C]	IPR036191	RRF superfamily	Homologous Superfamily
L [auth C]	IPR002661	Ribosome recycling factor	Family
A [auth 1]	IPR037147	Large ribosomal subunit protein bL28 superfamily	Homologous Superfamily
A [auth 1]	IPR050096	Bacterial ribosomal protein bL28	Family
A [auth 1]	IPR001383	Large ribosomal subunit protein bL28, bacteria	Family
A [auth 1]	IPR026569	Large ribosomal subunit protein bL28	Family
A [auth 1]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.