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 9SMD | pdb_00009smd

Ribosome-dome complex including the Sec-translocon (SecYEG-SecA-SecDF) from antibiotics treated Mycoplasma pneumoniae cells (Combined)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth 2]SCOP2B SuperfamilyRibosomal protein L36 8107602 3001346 SCOP2B (2022-06-29)
LB [auth z]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107630 3001320 SCOP2B (2022-06-29)
KB [auth y]SCOP2B SuperfamilyZn-binding ribosomal proteins 8107612 3001320 SCOP2B (2022-06-29)
GB [auth u]SCOP2B SuperfamilyRibosomal L27 protein-like 8107616 3000539 SCOP2B (2022-06-29)
FB [auth t]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107660 3000334 SCOP2B (2022-06-29)
CB [auth q]SCOP2B Superfamilyl21p-like 8107634 3002005 SCOP2B (2022-06-29)
BB [auth p]SCOP2B SuperfamilyRibosomal protein L20 8107632 3000563 SCOP2B (2022-06-29)
AB [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8107604 3000334 SCOP2B (2022-06-29)
ZA [auth n]SCOP2B SuperfamilyTranslational machinery components 8107652 3000571 SCOP2B (2022-06-29)
YA [auth m]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8107666 3000995 SCOP2B (2022-06-29)
XA [auth l]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8107596 3000884 SCOP2B (2022-06-29)
WA [auth k]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8107650 3001045 SCOP2B (2022-06-29)
VA [auth j]SCOP2B Superfamily50S Ribosomal protein L14-like 8107662 3000433 SCOP2B (2022-06-29)
UA [auth i]SCOP2B SuperfamilyRibosomal protein L13 8107608 3001134 SCOP2B (2022-06-29)
PA [auth d]SCOP2B SuperfamilyRL5-like 8107658 3001709 SCOP2B (2022-06-29)
OA [auth c]SCOP2B SuperfamilyRibosomal protein L4 8107624 3001146 SCOP2B (2022-06-29)
NA [auth b]SCOP2B SuperfamilyTranslational proteins 8107626 3000811 SCOP2B (2022-06-29)
GA [auth R]SCOP2B SuperfamilyRibosomal protein S19 8107622 3000686 SCOP2B (2022-06-29)
EA [auth P]SCOP2B SuperfamilyNucleic acid-binding proteins 8107664 3000135 SCOP2B (2022-06-29)
DA [auth O]SCOP2B SuperfamilyRibosomal protein S16 8107372 3000680 SCOP2B (2022-06-29)
CA [auth N]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8107606 3001284 SCOP2B (2022-06-29)
BA [auth M]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8107656 3000068 SCOP2B (2022-06-29)
AA [auth L]SCOP2B SuperfamilyS13-like H2TH domain 8107648 3000053 SCOP2B (2022-06-29)
Z [auth K]SCOP2B SuperfamilyNucleic acid-binding proteins 8107620 3000135 SCOP2B (2022-06-29)
Y [auth J]SCOP2B SuperfamilyTranslational machinery components 8107646 3000571 SCOP2B (2022-06-29)
X [auth I]SCOP2B SuperfamilyRibosomal protein S10 8107628 3001336 SCOP2B (2022-06-29)
W [auth H]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8107610 3000100 SCOP2B (2022-06-29)
V [auth G]SCOP2B SuperfamilyRibosomal protein S8 8107654 3000709 SCOP2B (2022-06-29)
U [auth F]SCOP2B SuperfamilyRibosomal protein S7 8107618 3000799 SCOP2B (2022-06-29)
B [auth 1]SCOP2B SuperfamilyL35p-like 8107614 3000790 SCOP2B (2022-06-29)
S [auth C]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8107598 3001473 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G [auth 2]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
PB [auth 18],
QB [auth 16]
PF21637Family of unknown function (DUF6856) (DUF6856)Family of unknown function (DUF6856)- Family
OB [auth 15]PF12506Protein of unknown function (DUF3713) (DUF3713)Protein of unknown function (DUF3713)- Family
NB [auth 14]PF12506Protein of unknown function (DUF3713) (DUF3713)Protein of unknown function (DUF3713)- Family
MB [auth 13]PF12506Protein of unknown function (DUF3713) (DUF3713)Protein of unknown function (DUF3713)- Family
LA [auth Z]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
JA [auth W]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
JA [auth W]PF07650KH domain (KH_2)KH domainDomain
JA [auth W]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
IA [auth T]PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
IA [auth T]PF00467KOW motif (KOW)KOW motif- Family
HA [auth S]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
HA [auth S]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
GA [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
GA [auth R]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
FA [auth Q]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
FA [auth Q]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
EA [auth P]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
EA [auth P]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
DA [auth O]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
C [auth 10]PF00344SecY (SecY)SecY- Family
CA [auth N]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
CA [auth N]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
BA [auth M]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
BA [auth M]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
AA [auth L]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
AA [auth L]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
Z [auth K]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
Z [auth K]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
Y [auth J]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
Y [auth J]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
X [auth I]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
X [auth I]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
W [auth H]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
W [auth H]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
W [auth H]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
V [auth G]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
U [auth F]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
U [auth F]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
U [auth F]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
T [auth E]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
T [auth E]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
B [auth 1]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
S [auth C]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
S [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
S [auth C]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
P [auth AA]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
P [auth AA]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
O [auth A]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
O [auth A]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
O [auth A]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
N [auth 9]PF01043SecA preprotein cross-linking domain (SecA_PP_bind)SecA preprotein cross-linking domainThe SecA ATPase is involved in the insertion and retraction of preproteins through the plasma membrane. This domain has been found to cross-link to preproteins, thought to indicate a role in preprotein binding. The pre-protein cross-linking domai ...The SecA ATPase is involved in the insertion and retraction of preproteins through the plasma membrane. This domain has been found to cross-link to preproteins, thought to indicate a role in preprotein binding. The pre-protein cross-linking domain is comprised of two sub domains that are inserted within the ATPase domain [1].
Domain
N [auth 9]PF07517SecA DEAD-like domain (SecA_DEAD)SecA DEAD-like domainSecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner [1,2]. This dom ...SecA protein binds to the plasma membrane where it interacts with proOmpA to support translocation of proOmpA through the membrane. SecA protein achieves this translocation, in association with SecY protein, in an ATP dependent manner [1,2]. This domain represents the N-terminal ATP-dependent helicase domain, which is related to the Pfam:PF00270 [3].
Domain
N [auth 9]PF07516SecA Wing and Scaffold domain (SecA_SW)SecA Wing and Scaffold domain- Family
N [auth 9]PF21090SecA P-loop domain (P-loop_SecA)SecA P-loop domainSecA is the preprotein translocase ATPase subunit and a superfamily 2 (SF2) RNA helicase [4]. This entry corresponds to the second P-loop domain. Domain
A [auth 0]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth 4]5S ribosomal RNA---
H [auth 3]23S ribosomal RNA---
G [auth 2]50S ribosomal protein L36
PB [auth 18],
QB [auth 16]
Uncharacterized lipoprotein MG348 homolog- -
OB [auth 15]Uncharacterized lipoprotein MG338 homolog- -
NB [auth 14]Uncharacterized lipoprotein MG309 homolog- -
MB [auth 13]Uncharacterized lipoprotein MG307 homolog- -
LB [auth z]50S ribosomal protein L33 1
KB [auth y]50S ribosomal protein L32
IB [auth w]50S ribosomal protein L29
HB [auth v]50S ribosomal protein L28
F [auth 17]SecDF- -
GB [auth u]50S ribosomal protein L27
FB [auth t]50S ribosomal protein L24
EB [auth s]Large ribosomal subunit protein uL23
DB [auth r]50S ribosomal protein L22
CB [auth q]50S ribosomal protein L21
BB [auth p]50S ribosomal protein L20
AB [auth o]50S ribosomal protein L19
ZA [auth n]Large ribosomal subunit protein uL18
YA [auth m]50S ribosomal protein L17
XA [auth l]50S ribosomal protein L16
E [auth 12]SecE
WA [auth k]50S ribosomal protein L15
VA [auth j]50S ribosomal protein L14
UA [auth i]50S ribosomal protein L13
TA [auth h]50S ribosomal protein L11
SA [auth g]50S ribosomal protein L10
RA [auth f]50S ribosomal protein L9
QA [auth e]50S ribosomal protein L6
PA [auth d]50S ribosomal protein L5
OA [auth c]50S ribosomal protein L4
NA [auth b]50S ribosomal protein L3
D [auth 11]Probable protein-export membrane protein SecG
MA [auth a]50S ribosomal protein L2
LA [auth Z]Nascent peptide---
KA [auth Y]mRNA---
JA [auth W]30S ribosomal protein S3
IA [auth T]30S ribosomal protein S21
HA [auth S]30S ribosomal protein S20
GA [auth R]30S ribosomal protein S19
FA [auth Q]30S ribosomal protein S18
EA [auth P]30S ribosomal protein S17
DA [auth O]30S ribosomal protein S16
C [auth 10]Protein translocase subunit SecY-
CA [auth N]30S ribosomal protein S15
BA [auth M]30S ribosomal protein S14 type Z
AA [auth L]30S ribosomal protein S13
Z [auth K]30S ribosomal protein S12
Y [auth J]30S ribosomal protein S11
X [auth I]30S ribosomal protein S10
W [auth H]Small ribosomal subunit protein uS9
V [auth G]30S ribosomal protein S8
U [auth F]30S ribosomal protein S7
T [auth E]30S ribosomal protein S6
B [auth 1]50S ribosomal protein L35
S [auth C]30S ribosomal protein S4
JB [auth x],
R [auth AC]
50S ribosomal protein L31
Q [auth AB]mRNA---
P [auth AA]30S ribosomal protein S5
O [auth A]30S ribosomal protein S2
N [auth 9]Protein translocase subunit SecA
M [auth 8]tRNA-Lys (A-site)---
L [auth 7]tRNA-Asp (P-site)---
K [auth 6]16S ribosomal RNA---
J [auth 5]16S ribosomal RNA---
A [auth 0]Large ribosomal subunit protein bL34

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
G [auth 2]IPR000473Large ribosomal subunit protein bL36Family
G [auth 2]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
PB [auth 18],
QB [auth 16]
IPR049194Protein of unknown function DUF6856Family
OB [auth 15]IPR022186Protein of unknown function DUF3713Family
NB [auth 14]IPR022186Protein of unknown function DUF3713Family
MB [auth 13]IPR022186Protein of unknown function DUF3713Family
LB [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LB [auth z]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
LB [auth z]IPR001705Large ribosomal subunit protein bL33Family
LB [auth z]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
KB [auth y]IPR002677Large ribosomal subunit protein bL32Family
KB [auth y]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KB [auth y]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
IB [auth w]IPR050063Universal ribosomal protein uL29Family
IB [auth w]IPR001854Large ribosomal subunit protein uL29Family
IB [auth w]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IB [auth w]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
HB [auth v]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
HB [auth v]IPR050096Bacterial ribosomal protein bL28Family
HB [auth v]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
HB [auth v]IPR026569Large ribosomal subunit protein bL28Family
HB [auth v]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
GB [auth u]IPR001684Large ribosomal subunit protein bL27Family
GB [auth u]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
FB [auth t]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
FB [auth t]IPR003256Large ribosomal subunit protein uL24Family
FB [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FB [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FB [auth t]IPR005824KOWDomain
FB [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EB [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EB [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EB [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
DB [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
DB [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
DB [auth r]IPR001063Large ribosomal subunit protein uL22Family
DB [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
DB [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
CB [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
CB [auth q]IPR001787Large ribosomal subunit protein bL21Family
CB [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
CB [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
BB [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
BB [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
BB [auth p]IPR005813Large ribosomal subunit protein bL20Family
AB [auth o]IPR001857Large ribosomal subunit protein bL19Family
AB [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
AB [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
AB [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
ZA [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
ZA [auth n]IPR057268Large ribosomal subunit protein uL18Family
ZA [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
YA [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
YA [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
YA [auth m]IPR000456Large ribosomal subunit protein bL17Family
XA [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
XA [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
XA [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
XA [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
XA [auth l]IPR047873Large ribosomal subunit protein uL16Family
E [auth 12]IPR005807SecE subunit of protein translocation complex, bacterial-likeFamily
WA [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
WA [auth k]IPR030878Large ribosomal subunit protein uL15Family
WA [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
WA [auth k]IPR063184Ribosomal protein uL15, N-terminal regionDomain
WA [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
VA [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
VA [auth j]IPR000218Large ribosomal subunit protein uL14Family
VA [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
VA [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
UA [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
UA [auth i]IPR005822Large ribosomal subunit protein uL13Family
UA [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
UA [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
TA [auth h]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
TA [auth h]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
TA [auth h]IPR000911Ribosomal protein uL11Family
TA [auth h]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
TA [auth h]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
TA [auth h]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
TA [auth h]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
SA [auth g]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
SA [auth g]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
SA [auth g]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
SA [auth g]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
SA [auth g]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
RA [auth f]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
RA [auth f]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
RA [auth f]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
RA [auth f]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
RA [auth f]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
RA [auth f]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
RA [auth f]IPR000244Large ribosomal subunit protein bL9Family
QA [auth e]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
QA [auth e]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
QA [auth e]IPR000702Large ribosomal subunit protein uL6-likeFamily
QA [auth e]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
QA [auth e]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
PA [auth d]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
PA [auth d]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
PA [auth d]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
PA [auth d]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
PA [auth d]IPR002132Large ribosomal subunit protein uL5Family
PA [auth d]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
OA [auth c]IPR013005Large ribosomal subunit protein uL4-likeFamily
OA [auth c]IPR002136Large ribosomal subunit protein uL4Family
OA [auth c]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
NA [auth b]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
NA [auth b]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
NA [auth b]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
NA [auth b]IPR000597Large ribosomal subunit protein uL3Family
D [auth 11]IPR004692Preprotein translocase SecG subunitFamily
MA [auth a]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
MA [auth a]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
MA [auth a]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth a]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth a]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
MA [auth a]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth a]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
MA [auth a]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
MA [auth a]IPR002171Large ribosomal subunit protein uL2Family
JA [auth W]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
JA [auth W]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
JA [auth W]IPR057258Small ribosomal subunit protein uS3Family
JA [auth W]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
JA [auth W]IPR004087K Homology domainDomain
JA [auth W]IPR004044K Homology domain, type 2Domain
JA [auth W]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
JA [auth W]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
JA [auth W]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
IA [auth T]IPR001911Small ribosomal subunit protein bS21Family
HA [auth S]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
HA [auth S]IPR002583Small ribosomal subunit protein bS20Family
GA [auth R]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
GA [auth R]IPR002222Small ribosomal subunit protein uS19Family
GA [auth R]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
GA [auth R]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
FA [auth Q]IPR001648Small ribosomal subunit protein bS18Family
FA [auth Q]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
FA [auth Q]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
EA [auth P]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
EA [auth P]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
EA [auth P]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
EA [auth P]IPR000266Small ribosomal subunit protein uS17Family
DA [auth O]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
DA [auth O]IPR000307Small ribosomal subunit protein bS16Family
C [auth 10]IPR002208SecY/SEC61-alpha familyFamily
C [auth 10]IPR030659SecY conserved siteConserved Site
C [auth 10]IPR026593Protein translocase subunit SecYFamily
C [auth 10]IPR023201SecY domain superfamilyHomologous Superfamily
CA [auth N]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
CA [auth N]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
CA [auth N]IPR000589Small ribosomal subunit protein uS15Family
BA [auth M]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
BA [auth M]IPR001209Small ribosomal subunit protein uS14Family
BA [auth M]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
BA [auth M]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
AA [auth L]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
AA [auth L]IPR001892Small ribosomal subunit protein uS13Family
AA [auth L]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
AA [auth L]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
AA [auth L]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
Z [auth K]IPR006032Small ribosomal subunit protein uS12Family
Z [auth K]IPR005679Ribosomal protein uS12, bacteriaFamily
Z [auth K]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Y [auth J]IPR001971Small ribosomal subunit protein uS11Family
Y [auth J]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
Y [auth J]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
Y [auth J]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
X [auth I]IPR001848Small ribosomal subunit protein uS10Family
X [auth I]IPR027486Small ribosomal subunit protein uS10 domainDomain
X [auth I]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
X [auth I]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
W [auth H]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
W [auth H]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
W [auth H]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
W [auth H]IPR000754Small ribosomal subunit protein uS9Family
W [auth H]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
V [auth G]IPR000630Small ribosomal subunit protein uS8Family
V [auth G]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
V [auth G]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
U [auth F]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
U [auth F]IPR000235Small ribosomal subunit protein uS7Family
U [auth F]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
U [auth F]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
U [auth F]IPR023798Small ribosomal subunit protein uS7 domainDomain
T [auth E]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
T [auth E]IPR000529Small ribosomal subunit protein bS6Family
T [auth E]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
T [auth E]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
T [auth E]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
B [auth 1]IPR021137Large ribosomal subunit protein bL35-likeFamily
B [auth 1]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
B [auth 1]IPR001706Large ribosomal subunit protein bL35Family
B [auth 1]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
S [auth C]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
S [auth C]IPR002942RNA-binding S4 domainDomain
S [auth C]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
S [auth C]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
S [auth C]IPR022801Small ribosomal subunit protein uS4Family
S [auth C]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
JB [auth x],
R [auth AC]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
JB [auth x],
R [auth AC]
IPR027491Large ribosomal subunit protein bL31 type AFamily
JB [auth x],
R [auth AC]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
JB [auth x],
R [auth AC]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
P [auth AA]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
P [auth AA]IPR000851Small ribosomal subunit protein uS5Family
P [auth AA]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
P [auth AA]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
P [auth AA]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
P [auth AA]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
P [auth AA]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
O [auth A]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
O [auth A]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
O [auth A]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
O [auth A]IPR001865Small ribosomal subunit protein uS2Family
N [auth 9]IPR011130SecA, preprotein cross-linking domainDomain
N [auth 9]IPR011116SecA Wing/ScaffoldDomain
N [auth 9]IPR036266SecA, Wing/Scaffold superfamilyHomologous Superfamily
N [auth 9]IPR001650Helicase, C-terminal domain-likeDomain
N [auth 9]IPR000185Protein translocase subunit SecAFamily
N [auth 9]IPR014001Helicase superfamily 1/2, ATP-binding domainDomain
N [auth 9]IPR014018SecA motor DEADDomain
N [auth 9]IPR020937SecA conserved siteConserved Site
N [auth 9]IPR011115SecA DEAD-like, N-terminalDomain
N [auth 9]IPR044722SecA, C-terminal helicase domainDomain
N [auth 9]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
N [auth 9]IPR036670SecA, preprotein cross-linking domain superfamilyHomologous Superfamily
A [auth 0]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
A [auth 0]IPR000271Large ribosomal subunit protein bL34Family