9RLT | pdb_00009rlt

dimerised 13S-13S+Beta5 proteasome precursor complexes


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
S [auth U]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079169 3000131 SCOP2B (2022-06-29)
H [auth G]SCOP2B SuperfamilyClass II glutamine amidotransferases 8079169 3000131 SCOP2B (2022-06-29)
R [auth Q]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064020 3000131 SCOP2B (2022-06-29)
G [auth C]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064020 3000131 SCOP2B (2022-06-29)
Q [auth P]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064048 3000131 SCOP2B (2022-06-29)
F [auth B]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064048 3000131 SCOP2B (2022-06-29)
O [auth T]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064066 3000131 SCOP2B (2022-06-29)
D [auth F]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064066 3000131 SCOP2B (2022-06-29)
N [auth S]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064026 3000131 SCOP2B (2022-06-29)
C [auth E]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064026 3000131 SCOP2B (2022-06-29)
M [auth R]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064012 3000131 SCOP2B (2022-06-29)
B [auth D]SCOP2B SuperfamilyClass II glutamine amidotransferases 8064012 3000131 SCOP2B (2022-06-29)
Z [auth 4]SCOP2B SuperfamilyPAC2/POC1 chaperone-like 8053587 3001084 SCOP2B (2022-06-29)
X [auth 7]SCOP2B SuperfamilyPAC2/POC1 chaperone-like 8053587 3001084 SCOP2B (2022-06-29)
L [auth O]SCOP2B SuperfamilyClass II glutamine amidotransferases 8036842 3000131 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyClass II glutamine amidotransferases 8036842 3000131 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I,
T [auth W]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
H [auth G],
S [auth U]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
H [auth G],
S [auth U]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
G [auth C],
R [auth Q]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
G [auth C],
R [auth Q]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
F [auth B],
Q [auth P]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
F [auth B],
Q [auth P]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
E [auth 3],
P [auth 6]
PF05348Proteasome maturation factor UMP1 (UMP1)Proteasome maturation factor UMP1- Family
D [auth F],
O [auth T]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
D [auth F],
O [auth T]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
C [auth E],
N [auth S]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
C [auth E],
N [auth S]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
B [auth D],
M [auth R]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
B [auth D],
M [auth R]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family
AA [auth 5],
Y [auth 8]
PF09754PAC2 family (PAC2)PAC2 family- Family
X [auth 7],
Z [auth 4]
PF10450POC1 chaperone (POC1)POC1 chaperone- Family
K,
V [auth Y]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
J,
U [auth X]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A,
L [auth O]
PF00227Proteasome subunit (Proteasome)Proteasome subunitThe proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ...The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity: from HslV (heat shock locus v), which is encoded by 1 gene in bacteria, to the eukaryotic 20S proteasome, which is encoded by more than 14 genes [1]. Recently evidence of two novel groups of bacterial proteasomes was proposed. The first is Anbu, which is sparsely distributed among cyanobacteria and proteobacteria [1]. The second is call beta-proteobacteria proteasome homologue (BPH) [1].
Domain
A,
L [auth O]
PF10584Proteasome subunit A N-terminal signature (Proteasome_A_N)Proteasome subunit A N-terminal signature- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I,
T [auth W]
Proteasome subunit beta type-2
H [auth G],
S [auth U]
Probable proteasome subunit alpha type-7
G [auth C],
R [auth Q]
Proteasome subunit alpha type-3-
F [auth B],
Q [auth P]
Proteasome subunit alpha type-2-
E [auth 3],
P [auth 6]
Proteasome maturation factor UMP1-
D [auth F],
O [auth T]
Proteasome subunit alpha type-6-
C [auth E],
N [auth S]
Proteasome subunit alpha type-5-
B [auth D],
M [auth R]
Proteasome subunit alpha type-4-
AA [auth 5],
Y [auth 8]
Proteasome assembly chaperone 2-
X [auth 7],
Z [auth 4]
Proteasome chaperone 1-
W [auth Z]Proteasome subunit beta type-5
K,
V [auth Y]
Proteasome subunit beta type-4
J,
U [auth X]
Proteasome subunit beta type-3
A,
L [auth O]
Proteasome subunit alpha type-1-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I,
T [auth W]
IPR016050Proteasome beta-type subunit, conserved siteConserved Site
I,
T [auth W]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
I,
T [auth W]
IPR024689Proteasome beta subunit, C-terminalDomain
I,
T [auth W]
IPR023333Proteasome B-type subunitFamily
I,
T [auth W]
IPR001353Proteasome, subunit alpha/betaFamily
I,
T [auth W]
IPR000243Peptidase T1A, proteasome beta-subunitFamily
H [auth G],
S [auth U]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
H [auth G],
S [auth U]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
H [auth G],
S [auth U]
IPR050115Proteasome subunit alphaFamily
H [auth G],
S [auth U]
IPR023332Proteasome alpha-type subunitFamily
H [auth G],
S [auth U]
IPR001353Proteasome, subunit alpha/betaFamily
G [auth C],
R [auth Q]
IPR016050Proteasome beta-type subunit, conserved siteConserved Site
G [auth C],
R [auth Q]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
G [auth C],
R [auth Q]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
G [auth C],
R [auth Q]
IPR050115Proteasome subunit alphaFamily
G [auth C],
R [auth Q]
IPR023332Proteasome alpha-type subunitFamily
G [auth C],
R [auth Q]
IPR001353Proteasome, subunit alpha/betaFamily
F [auth B],
Q [auth P]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
F [auth B],
Q [auth P]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
F [auth B],
Q [auth P]
IPR050115Proteasome subunit alphaFamily
F [auth B],
Q [auth P]
IPR023332Proteasome alpha-type subunitFamily
F [auth B],
Q [auth P]
IPR001353Proteasome, subunit alpha/betaFamily
E [auth 3],
P [auth 6]
IPR008012Proteasome maturation factor Ump1Family
D [auth F],
O [auth T]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
D [auth F],
O [auth T]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
D [auth F],
O [auth T]
IPR050115Proteasome subunit alphaFamily
D [auth F],
O [auth T]
IPR023332Proteasome alpha-type subunitFamily
D [auth F],
O [auth T]
IPR001353Proteasome, subunit alpha/betaFamily
C [auth E],
N [auth S]
IPR033812Proteasome subunit alpha5Family
C [auth E],
N [auth S]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
C [auth E],
N [auth S]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
C [auth E],
N [auth S]
IPR050115Proteasome subunit alphaFamily
C [auth E],
N [auth S]
IPR023332Proteasome alpha-type subunitFamily
C [auth E],
N [auth S]
IPR001353Proteasome, subunit alpha/betaFamily
B [auth D],
M [auth R]
IPR016050Proteasome beta-type subunit, conserved siteConserved Site
B [auth D],
M [auth R]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
B [auth D],
M [auth R]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
B [auth D],
M [auth R]
IPR050115Proteasome subunit alphaFamily
B [auth D],
M [auth R]
IPR023332Proteasome alpha-type subunitFamily
B [auth D],
M [auth R]
IPR001353Proteasome, subunit alpha/betaFamily
AA [auth 5],
Y [auth 8]
IPR019151Proteasome assembly chaperone 2Family
AA [auth 5],
Y [auth 8]
IPR016562Proteasome assembly chaperone 2, eukaryoticFamily
AA [auth 5],
Y [auth 8]
IPR038389Proteasome assembly chaperone 2 superfamilyHomologous Superfamily
X [auth 7],
Z [auth 4]
IPR018855Proteasome chaperone 1, fungiFamily
X [auth 7],
Z [auth 4]
IPR038605Proteasome chaperone 1 superfamilyHomologous Superfamily
W [auth Z]IPR016050Proteasome beta-type subunit, conserved siteConserved Site
W [auth Z]IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
W [auth Z]IPR023333Proteasome B-type subunitFamily
W [auth Z]IPR001353Proteasome, subunit alpha/betaFamily
W [auth Z]IPR000243Peptidase T1A, proteasome beta-subunitFamily
K,
V [auth Y]
IPR016050Proteasome beta-type subunit, conserved siteConserved Site
K,
V [auth Y]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
K,
V [auth Y]
IPR023333Proteasome B-type subunitFamily
K,
V [auth Y]
IPR001353Proteasome, subunit alpha/betaFamily
K,
V [auth Y]
IPR035206Proteasome subunit beta 2Family
J,
U [auth X]
IPR016050Proteasome beta-type subunit, conserved siteConserved Site
J,
U [auth X]
IPR023333Proteasome B-type subunitFamily
J,
U [auth X]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
J,
U [auth X]
IPR001353Proteasome, subunit alpha/betaFamily
J,
U [auth X]
IPR033811Proteasome beta 3 subunitFamily
A,
L [auth O]
IPR029055Nucleophile aminohydrolases, N-terminalHomologous Superfamily
A,
L [auth O]
IPR034642Proteasome subunit alpha6Family
A,
L [auth O]
IPR000426Proteasome alpha-subunit, N-terminal domainDomain
A,
L [auth O]
IPR050115Proteasome subunit alphaFamily
A,
L [auth O]
IPR023332Proteasome alpha-type subunitFamily
A,
L [auth O]
IPR001353Proteasome, subunit alpha/betaFamily