9OUN | pdb_00009oun

Native GABA-A receptor from rat cerebella, beta2-alpha1-beta2-alpha1-gamma2 subtype, in complex with GABA and PZ-II-029

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth A]RVPe9ounA1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
I [auth K]RVPe9ounK1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
D [auth L]RVPe9ounL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
C [auth J]RVPe9ounJ1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)
B [auth H]RVPe9ounH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: RVPECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
F [auth B],
H [auth E]		PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain
E [auth A],
G [auth C]		PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain
A [auth D]PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domainThis family is the extracellular ligand binding domain of these ion channels [1]. This domain forms a pentameric arrangement in the known structure. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F [auth B],
H [auth E]		Gamma-aminobutyric acid receptor subunit beta-2
E [auth A],
G [auth C]		Gamma-aminobutyric acid receptor subunit alpha-1
D [auth L],
I [auth K]		8E3 Fab light chain---
B [auth H],
C [auth J]		8E3 Fab heavy chain---
A [auth D]Gamma-aminobutyric acid receptor subunit gamma-2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
F [auth B],
H [auth E]		IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
F [auth B],
H [auth E]		IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
F [auth B],
H [auth E]		IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
F [auth B],
H [auth E]		IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
F [auth B],
H [auth E]		IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
F [auth B],
H [auth E]		IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
F [auth B],
H [auth E]		IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
F [auth B],
H [auth E]		IPR038050Neuronal acetylcholine receptorHomologous Superfamily
F [auth B],
H [auth E]		IPR006201Neurotransmitter-gated ion-channelFamily
E [auth A],
G [auth C]		IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
E [auth A],
G [auth C]		IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
E [auth A],
G [auth C]		IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
E [auth A],
G [auth C]		IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
E [auth A],
G [auth C]		IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
E [auth A],
G [auth C]		IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
E [auth A],
G [auth C]		IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
E [auth A],
G [auth C]		IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
E [auth A],
G [auth C]		IPR038050Neuronal acetylcholine receptorHomologous Superfamily
E [auth A],
G [auth C]		IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
E [auth A],
G [auth C]		IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
E [auth A],
G [auth C]		IPR006201Neurotransmitter-gated ion-channelFamily
A [auth D]IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
A [auth D]IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A [auth D]IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A [auth D]IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
A [auth D]IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
A [auth D]IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
A [auth D]IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A [auth D]IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
A [auth D]IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A [auth D]IPR006201Neurotransmitter-gated ion-channelFamily