9OMZ | pdb_00009omz

Cryo-EM structure of a pentameric RAD51-XRCC3-RAD51C-RAD51D-XRCC2 (51-X3CDX2) complex.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth B]SCOP2B SuperfamilyHelix-hairpin-helix tandem 8056645 3000163 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyRecA-like P-loop NTPases 8056644 3002019 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyHelix-hairpin-helix tandem 8056646 3000163 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
D [auth B]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
D [auth B]PF14520Helix-hairpin-helix domain (HHH_5)Helix-hairpin-helix domainDomain
C [auth D]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
B [auth C]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
PF26169XRCC3/RpoA-like, helix-hairpin-helix domain (HHH_XRCC3_RpoA)XRCC3/RpoA-like, helix-hairpin-helix domainThis domain is found at the N-terminal end of human DNA repair protein XRCC3 and similar proteins, and at the C-terminal end of plant DNA-directed RNA polymerase subunit alpha (RpoA). XRCC3 is involved in the homologous recombination repair pathway o ...This domain is found at the N-terminal end of human DNA repair protein XRCC3 and similar proteins, and at the C-terminal end of plant DNA-directed RNA polymerase subunit alpha (RpoA). XRCC3 is involved in the homologous recombination repair pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions. It is part of the RAD51 paralogue protein complex CX3 [5-7]. This domain is predicted to adopt an helix-hairpin-helix (HHH) fold.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth X]DNA repair protein XRCC2
D [auth B]DNA repair protein RAD51 homolog 1
C [auth D]DNA repair protein RAD51 homolog 4
B [auth C]DNA repair protein RAD51 homolog 3
DNA repair protein XRCC3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth X]IPR030547DNA repair protein XRCC2Family
E [auth X]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth X]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
E [auth X]IPR013632Rad51-like, C-terminalDomain
D [auth B]IPR020587DNA recombination and repair protein RecA, monomer-monomer interfaceDomain
D [auth B]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth B]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
D [auth B]IPR003593AAA+ ATPase domainDomain
D [auth B]IPR011941DNA recombination/repair protein Rad51Family
D [auth B]IPR016467DNA recombination and repair protein, RecA-likeFamily
D [auth B]IPR013632Rad51-like, C-terminalDomain
D [auth B]IPR010995DNA repair Rad51/transcription factor NusA, alpha-helicalHomologous Superfamily
C [auth D]IPR051988Homologous Recombination Repair RAD51 ParalogFamily
C [auth D]IPR003593AAA+ ATPase domainDomain
C [auth D]IPR047323DNA repair protein RAD51 homolog 4, C-terminalDomain
C [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth D]IPR016467DNA recombination and repair protein, RecA-likeFamily
C [auth D]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
C [auth D]IPR013632Rad51-like, C-terminalDomain
C [auth D]IPR048943RAD51D, N-terminal domainDomain
B [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth C]IPR016467DNA recombination and repair protein, RecA-likeFamily
B [auth C]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
B [auth C]IPR013632Rad51-like, C-terminalDomain
B [auth C]IPR052093Homologous Recombination Repair MediatorFamily
IPR047348DNA repair protein XRCC3-like, C-terminalDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR016467DNA recombination and repair protein, RecA-likeFamily
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
IPR013632Rad51-like, C-terminalDomain
IPR058766XRCC3/RAD51 homolog 2, helix-hairpin-helix domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
E [auth X]O43543
D [auth B]Q06609
C [auth D]O75771
B [auth C]O43502
O43542