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 9NQ7 | pdb_00009nq7

Cryo-EM structure of Csm/AcrIIIA2/enolase 4:3 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
S [auth Q]DNA_ligase_A_Ne9nq7Q1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
R [auth N]DNA_ligase_A_Ne9nq7N1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
Q [auth O]DNA_ligase_A_Ne9nq7O1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
P [auth M]DNA_ligase_A_Ne9nq7M1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
O [auth K]DNA_ligase_A_Ne9nq7K1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
N [auth P]DNA_ligase_A_Ne9nq7P1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
M [auth L]DNA_ligase_A_Ne9nq7L1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
L [auth S]DNA_ligase_A_Ne9nq7S1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
K [auth J]DNA_ligase_A_Ne9nq7J1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
J [auth I]DNA_ligase_A_Ne9nq7I1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
F [auth D]DNA_ligase_A_Ne9nq7D1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
I [auth G]DNA_ligase_A_Ne9nq7G1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
H [auth E]DNA_ligase_A_Ne9nq7E1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
G [auth C]DNA_ligase_A_Ne9nq7C1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
E [auth F]DNA_ligase_A_Ne9nq7F1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: DNA_ligase_A_NECOD (v295.2)
D [auth B]LSDAT_euke9nq7B1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LSDAT_eukECOD (v295.2)
C [auth A]LSDAT_euke9nq7A1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LSDAT_eukECOD (v295.2)
B [auth H]LSDAT_euke9nq7H1 A: alpha arraysX: Hypothetical protein YqbG-likeH: Hypothetical protein YqbG-likeT: alpha/beta-HydrolasesF: LSDAT_eukECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
AcrIIIA2- - -
Enolase
F [auth D],
J [auth I],
K [auth J]
CRISPR system Cms protein Csm2- - -
E [auth F],
G [auth C],
H [auth E],
I [auth G]
CRISPR system Cms endoribonuclease Csm3- - -
D [auth B]CRISPR system Cms protein Csm4- - -
C [auth A]CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)- - -
B [auth H]CRISPR system Cms protein Csm5- - -
A [auth R]RNA (41-MER)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR020809Enolase, conserved siteConserved Site
IPR020810Enolase, C-terminal TIM barrel domainDomain
IPR020811Enolase, N-terminalDomain
IPR000941EnolaseFamily
IPR029017Enolase-like, N-terminalHomologous Superfamily
IPR036849Enolase-like, C-terminal domain superfamilyHomologous Superfamily
F [auth D],
J [auth I],
K [auth J]
IPR010149CRISPR-associated protein, Csm2 Type III-AFamily
E [auth F],
G [auth C],
H [auth E],
I [auth G]
IPR052216CRISPR_Csm3_endoribonucleaseUnknown
E [auth F],
G [auth C],
H [auth E],
I [auth G]
IPR013412CRISPR-associated RAMP Csm3Family
E [auth F],
G [auth C],
H [auth E],
I [auth G]
IPR005537CRISPR type III-associated proteinDomain
D [auth B]IPR005537CRISPR type III-associated proteinDomain
D [auth B]IPR005510CRISPR type III-associated RAMP protein Csm4Family
D [auth B]IPR040932Csm4, C-terminalDomain
C [auth A]IPR000160GGDEF domainDomain
C [auth A]IPR013408CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1Family
C [auth A]IPR048693CRISPR RNA silencing complex Cmr2-like, C-terminal domainDomain
C [auth A]IPR052117CRISPR-associated Cas10/Csm1 subtype III-A proteinFamily
C [auth A]IPR041062Csm1, subunit domain BDomain
C [auth A]IPR054767Cas10/Cmr2, second palm domainDomain
C [auth A]IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
C [auth A]IPR006674HD domainDomain
B [auth H]IPR005537CRISPR type III-associated proteinDomain
B [auth H]IPR010173CRISPR-associated protein Csm5Family