Structure of cyclodipeptide synthase from Nocardia brasiliensis (Nbra-CDPS) in complex with RNA microhelices mimicking tRNA-Glu acceptor arm
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Beta-Casp | e9ialD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| C | Beta-Casp | e9ialC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| B | Beta-Casp | e9ialB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| A | Beta-Casp | e9ialA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF16715 | Cyclodipeptide synthase (CDPS) | Cyclodipeptide synthase | This family of proteins includes enzymes involved in the synthesis of cyclodipeptides using aminoacyl-tRNAs as substrates, including cyclo(L-leucyl-L-leucyl) synthase, cyclo(L-tyrosyl-L-tyrosyl) synthase and cyclo(L-leucyl-L-phenylalanyl) synthase. T ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| E [auth O], F [auth P] | RNA (5'-R(P*GP*UP*CP*CP*CP*CP*UP*UP*UP*CP*GP*AP*GP*GP*GP*GP*AP*CP*GP*CP*CP*A)-3') | - | - | - |
| Cyclodipeptide synthase | - | - |














