345 A SynPspA rod after incubation with EPL
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| ZA [auth r] | Beta-Casp | e9i01r1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| Z [auth R] | Beta-Casp | e9i01R1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| YA [auth q] | Beta-Casp | e9i01q1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| Y [auth Q] | Beta-Casp | e9i01Q1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| XA [auth p] | Beta-Casp | e9i01p1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| X [auth P] | Beta-Casp | e9i01P1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| WA [auth o] | Beta-Casp | e9i01o1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| W [auth O] | Beta-Casp | e9i01O1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| VA [auth n] | Beta-Casp | e9i01n1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| V [auth N] | Beta-Casp | e9i01N1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| UA [auth m] | Beta-Casp | e9i01m1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| U [auth M] | Beta-Casp | e9i01M1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| TA [auth l] | Beta-Casp | e9i01l1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| T [auth L] | Beta-Casp | e9i01L1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| SA [auth k] | Beta-Casp | e9i01k1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| S [auth K] | Beta-Casp | e9i01K1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| RA [auth j] | Beta-Casp | e9i01j1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| R [auth J] | Beta-Casp | e9i01J1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| QA [auth i] | Beta-Casp | e9i01i1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| Q [auth I] | Beta-Casp | e9i01I1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| PA [auth h] | Beta-Casp | e9i01h1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| P [auth H] | Beta-Casp | e9i01H1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| OA [auth g] | Beta-Casp | e9i01g1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| O [auth G] | Beta-Casp | e9i01G1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| NA [auth f] | Beta-Casp | e9i01f1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| N [auth F] | Beta-Casp | e9i01F1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| MA [auth e] | Beta-Casp | e9i01e1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| M [auth E] | Beta-Casp | e9i01E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| LA [auth d] | Beta-Casp | e9i01d1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| L [auth D] | Beta-Casp | e9i01D1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| KA [auth c] | Beta-Casp | e9i01c1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| K [auth C] | Beta-Casp | e9i01C1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| JA [auth b] | Beta-Casp | e9i01b1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| J [auth B] | Beta-Casp | e9i01B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| IA [auth a] | Beta-Casp | e9i01a1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| I [auth A] | Beta-Casp | e9i01A1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| HB [auth z] | Beta-Casp | e9i01z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| HA [auth Z] | Beta-Casp | e9i01Z1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| H [auth 0] | Beta-Casp | e9i0101 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| GB [auth y] | Beta-Casp | e9i01y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| GA [auth Y] | Beta-Casp | e9i01Y1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| G [auth 7] | Beta-Casp | e9i0171 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| FB [auth x] | Beta-Casp | e9i01x1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| FA [auth X] | Beta-Casp | e9i01X1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| F [auth 6] | Beta-Casp | e9i0161 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| EB [auth w] | Beta-Casp | e9i01w1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| EA [auth W] | Beta-Casp | e9i01W1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| E [auth 5] | Beta-Casp | e9i0151 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| DB [auth v] | Beta-Casp | e9i01v1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| DA [auth V] | Beta-Casp | e9i01V1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| D [auth 4] | Beta-Casp | e9i0141 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| CB [auth u] | Beta-Casp | e9i01u1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| CA [auth U] | Beta-Casp | e9i01U1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| C [auth 3] | Beta-Casp | e9i0131 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| BB [auth t] | Beta-Casp | e9i01t1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| BA [auth T] | Beta-Casp | e9i01T1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| B [auth 2] | Beta-Casp | e9i0121 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| AB [auth s] | Beta-Casp | e9i01s1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| AA [auth S] | Beta-Casp | e9i01S1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
| A [auth 1] | Beta-Casp | e9i0111 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Beta-Casp | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04012 | PspA/IM30 family (PspA_IM30) | PspA/IM30 family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Chloroplast membrane-associated 30 kD protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR007157 | PspA/VIPP1 | Family |














