9HVW | pdb_00009hvw

Respiratory Syncytial Virus Fusion protein in the postfusion conformation in complex with monoclonal antibody 131-2a Fab

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Stathmin	e9hvwD01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Stathmin	ECOD (v295)
E	Beta-Casp	e9hvwE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
F	Beta-Casp	e9hvwF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
H [auth L]	Stathmin	e9hvwL01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Stathmin	ECOD (v295)
G [auth H]	Stathmin	e9hvwH01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Stathmin	ECOD (v295)
B	Beta-Casp	e9hvwB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
C	Beta-Casp	e9hvwC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Beta-Casp	ECOD (v295)
A	Stathmin	e9hvwA01	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Stathmin	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D, E, F	Fusion glycoprotein F1,Probable N-acetylmuramidase	amidase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds hydrolase activity, acting on glycosyl bonds peptidoglycan muralytic activity hydrolase activity, hydrolyzing O-glycosyl compounds lysozyme activity hexosaminidase activity peptidoglycan N-acetylglucosaminidase activity identical protein binding protein binding binding	cell septum assembly cytokinesis cellular component biogenesis cellular component organization cellular component assembly cytokinetic process division septum assembly cellular process cell cycle cell division cellular component organization or biogenesis cell cycle process defense response to bacterium biological process involved in interspecies interaction between organisms cell septum assembly cytokinesis cellular component biogenesis cellular component organization cellular component assembly cytokinetic process division septum assembly cellular process cell cycle cell division cellular component organization or biogenesis cell cycle process defense response to bacterium biological process involved in interspecies interaction between organisms response to stimulus response to other organism defense response response to bacterium response to stress response to external stimulus response to external biotic stimulus response to biotic stimulus cell wall organization or biogenesis cell wall organization external encapsulating structure organization disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing symbiont-mediated perturbation of host cellular process symbiont-mediated induction of syncytium formation symbiont-mediated perturbation of host process modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization membrane fusion fusion of virus membrane with host plasma membrane viral process membrane fusion involved in viral entry into host cell virion attachment to host cell receptor-mediated virion attachment to host cell adhesion of symbiont to host cell entry receptor-mediated virion attachment to host cell viral life cycle adhesion of symbiont to host symbiont entry into host cell symbiont entry into host	cellular anatomical structure extracellular region cell periphery plasma membrane membrane virion component viral membrane viral envelope host cell plasma membrane host cellular component host cell part host cell membrane other organism part virion membrane cellular anatomical structure extracellular region cell periphery plasma membrane membrane virion component viral membrane viral envelope host cell plasma membrane host cellular component host cell part host cell membrane other organism part virion membrane host intracellular part host cell Golgi membrane host cell Golgi apparatus host cell cytoplasm part host cell cytoplasm host cell endomembrane system host intracellular region
H [auth L]	131-2a light chain	-	-	-
G [auth H]	131-2a heavy chain	-	-	-
A, B, C	Fusion glycoprotein F0	identical protein binding protein binding binding	symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated induction of syncytium formation symbiont-mediated perturbation of host process modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization cellular component organization membrane fusion fusion of virus membrane with host plasma membrane viral process cellular process cellular component organization or biogenesis symbiont-mediated perturbation of host cellular process biological process involved in interspecies interaction between organisms symbiont-mediated induction of syncytium formation symbiont-mediated perturbation of host process modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction membrane organization cellular component organization membrane fusion fusion of virus membrane with host plasma membrane viral process cellular process cellular component organization or biogenesis membrane fusion involved in viral entry into host cell virion attachment to host cell receptor-mediated virion attachment to host cell adhesion of symbiont to host cell entry receptor-mediated virion attachment to host cell viral life cycle adhesion of symbiont to host symbiont entry into host cell symbiont entry into host	cell periphery cellular anatomical structure plasma membrane membrane virion component viral membrane viral envelope host cell plasma membrane host cellular component host cell part host cell membrane other organism part virion membrane host intracellular part cell periphery cellular anatomical structure plasma membrane membrane virion component viral membrane viral envelope host cell plasma membrane host cellular component host cell part host cell membrane other organism part virion membrane host intracellular part host cell Golgi membrane host cell Golgi apparatus host cell cytoplasm part host cell cytoplasm host cell endomembrane system host intracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D, E, F	IPR036779	LysM domain superfamily	Homologous Superfamily
D, E, F	IPR051056	Glycosyl Hydrolase Family 73	Family
D, E, F	IPR002901	Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain	Domain
D, E, F	IPR018392	LysM domain	Domain
D, E, F	IPR000776	Precursor fusion glycoprotein F0, Paramyxoviridae	Family
A, B, C	IPR000776	Precursor fusion glycoprotein F0, Paramyxoviridae	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.