CryoEM structure of PmcTnsC-dsDNA-AMPPNP in complex with PmcTnsAB hook
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | Beta-Casp | e9gmzG1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| F | Beta-Casp | e9gmzF1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| E | Beta-Casp | e9gmzE1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| D | Beta-Casp | e9gmzD1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| C | Beta-Casp | e9gmzC1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| B | Beta-Casp | e9gmzB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
| A | Beta-Casp | e9gmzA1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Beta-Casp | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| O [auth 2] | DNA | - | - | - |
| N [auth 1] | DNA | - | - | - |
| Integrase | - | |||
| AAA+ ATPase domain-containing protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
| IPR001584 | Integrase, catalytic core | Domain | |
| IPR014832 | TnsA endonuclease C-terminal | Domain | |
| IPR014833 | TnsA endonuclease, N-terminal | Domain | |
| IPR063619 | TnsB-like, C-terminal domain | Domain | |
| IPR012337 | Ribonuclease H-like superfamily | Homologous Superfamily | |
| IPR015378 | Transposase-like, Mu, C-terminal | Domain | |
| IPR049945 | ORC1/DEAH AAA+ ATPase domain | Domain | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |